Ogr00063 (Ophisaurus gracilis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ogr00063 T226462_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDX2
M03196_2.00 		Homo sapiens
KTTTATKRB
VYMATAAAM		 SELEX
Jolma et al.(2013)
CDX2_1 		0.326 1.000
CDX2
M05248_2.00 		Homo sapiens
NDTWAYRRYN
NRYYRTWAHN		 SELEX
Yin et al.(2017)
CDX2_eDBD_HT-SELEX_1 		0.326 1.000
CDX2
M05249_2.00 		Homo sapiens
NDWWATKRB
VYMATWWHN		 SELEX
Yin et al.(2017)
CDX2_eDBD_HT-SELEX_2 		0.326 1.000
CDX2
M08131_2.00 		Homo sapiens
YTTTATKRCHB
VDGYMATAAAR		 ChIP-seq
Mathelier et al.(2014)
MA0465.1 		0.326 1.000
CDX2
M09152_2.00 		Homo sapiens
DTTBATKGCHNB
VNDGCMATVAAH		 Misc
Kulakovskiy et al.(2013)
CDX2_HUMAN.H11MO.0.A 		0.326 1.000
CDX2
M10723_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q5_01 		0.326 1.000
CDX2
M10724_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q5_02 		0.326 1.000
CDX2
M10725_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q5 		0.326 1.000
CDX2
M10726_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q6 		0.326 1.000
CDX2
M05250_2.00 		Homo sapiens
NRTCGTAWHBNN
NNVDWTACGAYN		 SELEX
Yin et al.(2017)
CDX2_eDBD_Methyl-HT-SELEX 		0.326 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr00063 Homeodomain 41 83

Links

Other Homeodomain family TFs
Other Ophisaurus gracilis TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Myotis_brandtii_SLC6A7_10034750 Myotis brandtii Myotis_brandtii_SLC6A7_10034750 I 0.855
SPU_019656 Strongylocentrotus purpuratus SPU_019656 N 0.855
ENSGMOG00000004079 Gadus morhua ENSGMOG00000004079 N 0.846
Afo_R004424 Aptenodytes forsteri Afo_R004424 N 0.819
Tal_R010537 Tyto alba Tal_R010537 N 0.819
Brh_R009091 Buceros rhinoceros Brh_R009091 N 0.819
Cmyd_10006636 Chelonia mydas Cmyd_10006636 N 0.816
Brh_R009090 Buceros rhinoceros Brh_R009090 N 0.788
Afo_R004423 Aptenodytes forsteri Afo_R004423 N 0.788
Tal_R010536 Tyto alba Tal_R010536 N 0.788
Gfo_R001742 Geospiza fortis Gfo_R001742 N 0.788
Gfo_R001743 Geospiza fortis Gfo_R001743 N 0.786
Cmyd_10018206 Chelonia mydas Cmyd_10018206 N 0.786
ENSLOCG00000004278 Lepisosteus oculatus ENSLOCG00000004278 N 0.749
D915_09728 Fasciola hepatica D915_09728 N 0.706
SSLN_0001021301 Schistocephalus solidus SSLN_0001021301 I 0.706
DILT_0001226501 Diphyllobothrium latum DILT_0001226501 I 0.706
ISCW011755 Ixodes scapularis ISCW011755 N 0.701
scro Drosophila melanogaster FBgn0028993 D 0.700
ACYPI007360 Acyrthosiphon pisum ACYPI007360 N 0.700
CLEC007188 Cimex lectularius CLEC007188 N 0.695
SINV24463 Solenopsis invicta SINV24463 N 0.695
AALB003620 Anopheles albimanus AALB003620 N 0.695
MCOS_0000074401 Mesocestoides corti MCOS_0000074401 N 0.695
ASTEI04298 Anopheles stephensi ASTEI04298 N 0.695
Sjc_0057900 Schistosoma japonicum Sjc_0057900 N 0.694
DILT_0000246201 Diphyllobothrium latum DILT_0000246201 N 0.684
SPER_0002786601 Spirometra erinaceieuropaei SPER_0002786601 N 0.684
SPER_0003017401 Spirometra erinaceieuropaei SPER_0003017401 N 0.684
L892_g18619 Steinernema scapterisci L892_g18619 N 0.677
ENSECAG00000023678 Equus caballus ENSECAG00000023678 I 0.675
SNAPOd2T00004995001 Oikopleura dioica SNAPOd2T00004995001 N 0.670
nkx2-4 Xenopus tropicalis XB-GENE-487481 I 0.669
Hba_18080 Heterorhabditis bacteriophora Hba_18080 N 0.664
HNAJ_0000742201 Hymenolepis nana HNAJ_0000742201 N 0.664
ANCCEY_11186 Ancylostoma ceylanicum ANCCEY_11186 N 0.662
Ogr05812 Ophisaurus gracilis Ogr05812 N 0.662
ACEP14712 Atta cephalotes ACEP14712 N 0.662
NECAME_06897 Necator americanus NECAME_06897 N 0.662
YQE_02582 Dendroctonus ponderosae YQE_02582 N 0.662
AMAM017394 Anopheles maculatus AMAM017394 N 0.661
Ppa-ceh-28 Pristionchus pacificus PPA19627 N 0.655
scaffold28-EXSNAP2012.55 Pristionchus exspectatus scaffold28-EXSNAP2012.55 N 0.655
MhA1_Contig1149.frz3.gene7 Meloidogyne hapla MhA1_Contig1149.frz3.gene7 N 0.652
ACYPI061631 Acyrthosiphon pisum ACYPI061631 N 0.649
CBG11788 Caenorhabditis briggsae CBG11788 N 0.647
HmN_000453400 Hymenolepis microstoma HmN_000453400 I 0.646
GPUH_0000280301 Gongylonema pulchrum GPUH_0000280301 N 0.646
CBG27683 Caenorhabditis briggsae CBG27683 N 0.646
HmN_000683200 Hymenolepis microstoma HmN_000683200 N 0.646
AFAF019448 Anopheles farauti AFAF019448 N 0.644
Hsal_00498--XP_394578.2_APIME Harpegnathos saltator Hsal_00498--XP_394578.2_APIME N 0.644
ANCDUO_22746 Ancylostoma duodenale ANCDUO_22746 N 0.644
CGOC_0001416801 Cylicostephanus goldi CGOC_0001416801 N 0.644
D918_02763 Trichuris suis D918_02763 N 0.644
AMEM018396 Anopheles merus AMEM018396 N 0.644
AATE015248 Anopheles atroparvus AATE015248 N 0.644
BGIBMGA000762 Bombyx mori BGIBMGA000762 N 0.644
PXEA_0000454701 Protopolystoma xenopodis PXEA_0000454701 N 0.643
CGI_10013606 Crassostrea gigas CGI_10013606 N 0.637
PXEA_0002847001 Protopolystoma xenopodis PXEA_0002847001 N 0.626
ENSOPRG00000015148 Ochotona princeps ENSOPRG00000015148 N 0.623
e_gw.543.9.1 Branchiostoma floridae e_gw.543.9.1 N 0.620
e_gw.85.119.1 Branchiostoma floridae e_gw.85.119.1 N 0.620
SVUK_0001310301 Strongylus vulgaris SVUK_0001310301 N 0.614
F775_52178 Aegilops tauschii F775_52178 N 0.610
DILT_0000834901 Diphyllobothrium latum DILT_0000834901 I 0.607
HHEX Echinops telfairi ENSETEG00000009524 N 0.605
ENSEEUG00000003019 Erinaceus europaeus ENSEEUG00000003019 N 0.605
SBAD_0000184901 Soboliphyme baturini SBAD_0000184901 I 0.605
ENSOANG00000004408 Ornithorhynchus anatinus ENSOANG00000004408 N 0.605
nRc.2.0.1.g41491 Romanomermis culicivorax nRc.2.0.1.g41491 N 0.604
MhA1_Contig864.frz3.gene5 Meloidogyne hapla MhA1_Contig864.frz3.gene5 N 0.604
Cdx2 Dipodomys ordii ENSDORG00000005495 I 0.326
ENSBTAG00000001819 Bos taurus ENSBTAG00000001819 I 0.326
ENSAMEG00000002400 Ailuropoda melanoleuca ENSAMEG00000002400 I 0.326
ENSACAG00000003334 Anolis carolinensis ENSACAG00000003334 I 0.326
CDX2 Canis familiaris ENSCAFG00000006742 I 0.326
CDX2 Callithrix jacchus ENSCJAG00000019398 I 0.326
ENSCSAG00000017976 Chlorocebus sabaeus ENSCSAG00000017976 I 0.326
CDX2 Cavia porcellus ENSCPOG00000007276 I 0.326
CDX2 Dasypus novemcinctus ENSDNOG00000035260 I 0.326
CDX2 Echinops telfairi ENSETEG00000018589 I 0.326
CDX2 Tupaia belangeri ENSTBEG00000006155 I 0.326
ENSSTOG00000002918 Ictidomys tridecemlineatus ENSSTOG00000002918 I 0.326
CDX2 Ochotona princeps ENSOPRG00000003043 I 0.326
CDX2 Otolemur garnettii ENSOGAG00000026117 I 0.326
ENSOARG00000012435 Ovis aries ENSOARG00000012435 I 0.326
CDX2 Oryctolagus cuniculus ENSOCUG00000004893 I 0.326
CDX2 Sus scrofa ENSSSCG00000009317 I 0.326
ENSSHAG00000017862 Sarcophilus harrisii ENSSHAG00000017862 I 0.326
ENSPPYG00000005242 Pongo abelii ENSPPYG00000005242 I 0.326
CDX2 Procavia capensis ENSPCAG00000010752 I 0.326
ENSPSIG00000012291 Pelodiscus sinensis ENSPSIG00000012291 I 0.326
ENSPTRG00000005738 Pan troglodytes ENSPTRG00000005738 I 0.326
Cdx2 Rattus norvegicus ENSRNOG00000032759 I 0.326
CDX2 Pteropus vampyrus ENSPVAG00000011522 I 0.326
ENSMPUG00000005092 Mustela putorius furo ENSMPUG00000005092 I 0.326
CDX2 Monodelphis domestica ENSMODG00000009021 I 0.326
CDX2 Gorilla gorilla ENSGGOG00000005487 I 0.326
CDX2 Loxodonta africana ENSLAFG00000030146 I 0.326
CDX2 Homo sapiens ENSG00000165556 D 0.326
CDX2 Felis catus ENSFCAG00000026699 I 0.326
CDX2 Erinaceus europaeus ENSEEUG00000005045 I 0.326
ENSPANG00000024013 Papio anubis ENSPANG00000024013 I 0.326
Myotis_brandtii_CDX2_10026424 Myotis brandtii Myotis_brandtii_CDX2_10026424 I 0.326
ENSMEUG00000003391 Macropus eugenii ENSMEUG00000003391 I 0.326
ENSMLUG00000002563 Myotis lucifugus ENSMLUG00000002563 I 0.326
ENSMMUG00000016137 Macaca mulatta ENSMMUG00000016137 I 0.326
ENSBTAP00000002378-D1 Bos grunniens ENSBTAP00000002378-D1 I 0.326
ENSMMUP00000021225 Macaca fascicularis ENSMMUP00000021225 I 0.326
ENSMICG00000000751 Microcebus murinus ENSMICG00000000751 I 0.326
CDX2 Equus caballus ENSECAG00000000707 I 0.326