Solyc11g065110.1 (Solanum lycopersicum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Solyc11g065110.1 T223630_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.604 0.719
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc11g065110.1.1 Homeodomain 20 76

Links

Other Homeodomain family TFs
Other Solanum lycopersicum TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava16534.m1 Manihot esculenta cassava16534.m1 I 0.765
PGSC0003DMG400004714 Solanum tuberosum PGSC0003DMG400004714 I 0.757
29811.m000540 Ricinus communis 29811.m000540 N 0.738
mgf007720m Mimulus guttatus mgf007720m I 0.733
Solyc12g099760.1 Solanum lycopersicum Solyc12g099760.1 I 0.711
Thhalv10028592m.g Eutrema salsugineum Thhalv10028592m.g I 0.615
PK25011.1 Cannabis sativa PK25011.1 D 0.604
Cla008712 Citrullus lanatus Cla008712 I 0.604
GLYMA02G44910 Glycine max GLYMA02G44910 I 0.604
GLYMA14G03850 Glycine max GLYMA14G03850 I 0.604
GLYMA04G15260 Glycine max GLYMA04G15260 I 0.604
MDP0000207866 Malus domestica MDP0000207866 I 0.602
MTR_3g045830 Medicago truncatula MTR_3g045830 I 0.602
Cucsa.087050 Cucumis sativus Cucsa.087050 I 0.602
PRUPE_ppa005223mg Prunus persica PRUPE_ppa005223mg I 0.599