CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw.97.193.1
(
Branchiostoma floridae
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
e_gw.97.193.1
T227334_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG08197
M02064_2.00
Caenorhabditis briggsae
NNDACDNN
NNHGTHNN
PBM
Weirauch et al.(2014)
pTH6408
0.690
0.571
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw.97.193.1
Homeodomain
3
61
RHKRQVMQDMARPLKQWLIKHRDNPYPTKTEKILLALTSQMTLVQVSNWFANARRRLKN
Links
Other
Homeodomain
family TFs
Other
Branchiostoma floridae
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSGMOG00000011698
Gadus morhua
ENSGMOG00000011698
I
0.755
CRE09644
Caenorhabditis remanei
CRE09644
I
0.702
CBN12980
Caenorhabditis brenneri
CBN12980
I
0.692
CBN07279
Caenorhabditis brenneri
CBN07279
I
0.692
irx-1
Caenorhabditis elegans
WBGene00007984
I
0.690
CBG08197
Caenorhabditis briggsae
CBG08197
D
0.690
CJA00344
Caenorhabditis japonica
CJA00344
I
0.690
SNAPOd2T00027338001
Oikopleura dioica
SNAPOd2T00027338001
I
0.620
MBM_02986
Marssonina brunnea
MBM_02986
N
0.617