CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.2021s0009
(
Boechera stricta
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Bostr.2021s0009
T228109_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.2021s0009.1.p
Homeodomain
2
55
KRKSPVQVQALEAFYLAEQMYPTPKEMEDLGKSLGLTVKEVRGWFKRRRSRGKG
Bostr.2021s0009.2.p
Homeodomain
2
54
KRKSPVQVQALEAFYLEQMYPTPKEMEDLGKSLGLTVKEVRGWFKRRRSRGKG
Links
Other
Homeodomain
family TFs
Other
Boechera stricta
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT4G12750
Arabidopsis thaliana
AT4G12750
N
0.846
Carubv10004029m.g
Capsella rubella
Carubv10004029m.g
N
0.824
Cagra.1329s0011
Capsella grandiflora
Cagra.1329s0011
N
0.824
Thhalv10024262m.g
Eutrema salsugineum
Thhalv10024262m.g
N
0.754