CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0000951201
(
Gongylonema pulchrum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
GPUH_0000951201
T234103_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
acj6
M02241_2.00
Drosophila melanogaster
VTMATTAA
TTAATKAB
PBM
Weirauch et al.(2014)
pTH6053
0.648
0.456
POU6F1
M02094_2.00
Homo sapiens
VNTAATTANB
VNTAATTANB
PBM
Weirauch et al.(2014)
pTH6519
0.603
0.474
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0000951201-mRNA-1
Homeodomain
49
105
RRKRTNLHMAQRTALDTYFDINPRPDHDRMAEIAEIVGLDRDVVRVWFCNRRQKLRK
Links
Other
Homeodomain
family TFs
Other
Gongylonema pulchrum
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy