AGAP000067 (Anopheles gambiae)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
AGAP000067 T237226_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
toy
M03899_2.00
Drosophila melanogaster
TTYACGCWTGASTGMACAN

NTGTKCASTCAWGCGTRAA
SELEX
Nitta et al.(2015)
toy_1
0.901 0.901
toy
M03900_2.00
Drosophila melanogaster
NTYACGCWTSAVTGMRCNN

NNGYKCABTSAWGCGTRAN
SELEX
Nitta et al.(2015)
toy_2
0.901 0.901
toy
M03901_2.00
Drosophila melanogaster
VATTANBHAYGSWYSRN

NYSRWSCRTDVNTAATB
SELEX
Nitta et al.(2015)
toy_3
0.901 0.901
PAX6
M00342_2.00
Homo sapiens
NNNRCDMATTANNN

NNNTAATKHGYNNN
PBM
Barrera et al.(2016)
PAX6_REF
0.895 0.895
Pax6
M00540_2.00
Mus musculus
CBAATTAA

TTAATTVG
PBM
Berger et al.(2008)
Pax6_3838
0.895 0.895
PAX6
M03291_2.00
Homo sapiens
DTWYACGCWTGANTGMDYH

DRHKCANTCAWGCGTRWAH
SELEX
Jolma et al.(2013)
PAX6_1
0.895 0.895
PAX6
M05412_2.00
Homo sapiens
NYACGCHYSRNYRMNYN

NRNKYRNYSRDGCGTRN
SELEX
Yin et al.(2017)
PAX6_eDBD_HT-SELEX
0.895 0.895
PAX6
M05414_2.00
Homo sapiens
NYRCGCNYSRNYRVNYN

NRNBYRNYSRNGCGYRN
SELEX
Yin et al.(2017)
PAX6_FL_HT-SELEX
0.895 0.895
PAX6
M02689_2.00
Homo sapiens
TTYACGCWTSANTK

MANTSAWGCGTRAA
SELEX
Mathelier et al.(2014)
MA0069.1
0.895 0.895
PAX6
M09216_2.00
Homo sapiens
TYMYRCWTSRNT

ANYSAWGYRKRA
Misc
Kulakovskiy et al.(2013)
PAX6_HUMAN.H11MO.0.C
0.895 0.895
Pax6
M09217_2.00
Mus musculus
TYMYRCWTSRNT

ANYSAWGYRKRA
Misc
Kulakovskiy et al.(2013)
PAX6_MOUSE.H11MO.0.C
0.895 0.895
PAX6
M10806_2.00
Homo sapiens
NHNNTTYACGCWTSANTKVHH

DDBMANTSAWGCGTRAANNDN
Transfac
Matys et al.(2006)
V$PAX6_01
0.895 0.895
PAX6
M10807_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX6_Q2
0.895 0.895
PAX6
M00336_2.00
Homo sapiens
RTGCACAC

GTGTGCAY
PBM
Barrera et al.(2016)
PAX6_F258S
0.895 0.895
PAX6
M05413_2.00
Homo sapiens
DYRCGCWTSRNYRMNYN

NRNKYRNYSAWGCGYRH
SELEX
Yin et al.(2017)
PAX6_eDBD_Methyl-HT-SELEX
0.895 0.895
PAX6
M05415_2.00
Homo sapiens
NYACGCHYSRNYRMHYN

NRDKYRNYSRDGCGTRN
SELEX
Yin et al.(2017)
PAX6_FL_Methyl-HT-SELEX
0.895 0.895
PAX6
M00335_2.00
Homo sapiens
BRNNNNNN

NNNNNNYV
PBM
Barrera et al.(2016)
PAX6_A79E
0.890 0.890
PAX6
M00337_2.00
Homo sapiens
NMTAATTANNN

NNNTAATTAKN
PBM
Barrera et al.(2016)
PAX6_P118R
0.890 0.890
PAX6
M00338_2.00
Homo sapiens
WSGVRVDR

YHBYBCSW
PBM
Barrera et al.(2016)
PAX6_P68S
0.890 0.890
PAX6
M00339_2.00
Homo sapiens
NNNNSGKVGGHNN

NNDCCBMCSNNNN
PBM
Barrera et al.(2016)
PAX6_R128C
0.890 0.890
PAX6
M00340_2.00
Homo sapiens
NNNNNRN

NYNNNNN
PBM
Barrera et al.(2016)
PAX6_R242T
0.890 0.890
PAX6
M00341_2.00
Homo sapiens
BTSCCCSGSC

GSCSGGGSAV
PBM
Barrera et al.(2016)
PAX6_R26G
0.890 0.890
PAX6
M00343_2.00
Homo sapiens
NNNNCCCVKCNBN

NVNGMBGGGNNNN
PBM
Barrera et al.(2016)
PAX6_S119R
0.890 0.890
PAX6
M00344_2.00
Homo sapiens
NNMSASGBYNNN

NNNRVCSTSKNN
PBM
Barrera et al.(2016)
PAX6_V126D
0.890 0.890
ey
M03896_2.00
Drosophila melanogaster
CKAATTAD

HTAATTMG
SELEX
Nitta et al.(2015)
ey_1
0.878 0.878
ey
M03897_2.00
Drosophila melanogaster
HTAATCKMATTAD

HTAATKMGATTAD
SELEX
Nitta et al.(2015)
ey_2
0.878 0.878
ey
M03898_2.00
Drosophila melanogaster
WAAYYRRTTN

NAAYYRRTTW
SELEX
Nitta et al.(2015)
ey_3
0.878 0.878
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AGAP000067-PA Paired box 20 144
AGAP000067-PA Homeodomain 238 284

Links

Other Homeodomain,Paired box family TFs
Other Anopheles gambiae TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACEP19638 Atta cephalotes ACEP19638 I 0.000
BGLB013626 Biomphalaria glabrata BGLB013626 N 0.000
Bm2393 Brugia malayi Bm2393 N 0.000
BTMF_0000229601 Brugia timori BTMF_0000229601 N 0.000
BTMF_0001006201 Brugia timori BTMF_0001006201 I 0.000
CJA17191 Caenorhabditis japonica CJA17191 N 0.000
CRE28315 Caenorhabditis remanei CRE28315 N 0.000
D917_05046 Trichinella nativa D917_05046 N 0.000
D917_05048 Trichinella nativa D917_05048 N 0.000
D918_05288 Trichuris suis D918_05288 N 0.000
D918_06015 Trichuris suis D918_06015 N 0.000
DICVIV_02621 Dictyocaulus viviparus DICVIV_02621 N 0.000
EEL_0000629001 Elaeophora elaphi EEL_0000629001 N 0.000
EFV56090 Trichinella spiralis EFV56090 N 0.000
EFV56095 Trichinella spiralis EFV56095 N 0.000
EFV62220 Trichinella spiralis EFV62220 N 0.000
ENSAPLG00000003986 Anas platyrhynchos ENSAPLG00000003986 N 0.000
hmgb2a Danio rerio ENSDARG00000029722 N 0.000
pbrm1l Danio rerio ENSDARG00000077038 N 0.000
ENSOGAG00000011763 Otolemur garnettii ENSOGAG00000011763 N 0.000
Hmgb1 Rattus norvegicus ENSRNOG00000029813 N 0.000
estExt_fgeneshPB_pg.C_360007 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_360007 I 0.000
Eucgr.I01920 Eucalyptus grandis Eucgr.I01920 N 0.000
gene21411-v1.0-hybrid Fragaria vesca gene21411-v1.0-hybrid N 0.000
GLYMA01G33240 Glycine max GLYMA01G33240 I 0.000
GLYMA13G05140 Glycine max GLYMA13G05140 I 0.000
Gorai.006G024900 Gossypium raimondii Gorai.006G024900 I 0.000
GUITHDRAFT_73008 Guillardia theta GUITHDRAFT_73008 N 0.000
gww1.1.1.1342.1 Pichia stipitis gww1.1.1.1342.1 I 0.000
Hba_16915 Heterorhabditis bacteriophora Hba_16915 I 0.000
HelroG72245 Helobdella robusta HelroG72245 N 0.000
HPBE_0001796801 Heligmosomoides bakeri HPBE_0001796801 N 0.000
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.000
L892_g13433 Steinernema scapterisci L892_g13433 I 0.000
nAv.1.0.1.g09805 Acanthocheilonema viteae nAv.1.0.1.g09805 N 0.000
nDi.2.2.2.g06671 Dirofilaria immitis nDi.2.2.2.g06671 N 0.000
nDi.2.2.2.g10298 Dirofilaria immitis nDi.2.2.2.g10298 N 0.000
NECAME_06830 Necator americanus NECAME_06830 N 0.000
nLs.2.1.2.g08566 Litomosoides sigmodontis nLs.2.1.2.g08566 N 0.000
nOo.2.0.1.g07918 Onchocerca ochengi nOo.2.0.1.g07918 N 0.000
OFLC_0000496201 Onchocerca flexuosa OFLC_0000496201 N 0.000
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.000
PICST_23779 Scheffersomyces stipitis PICST_23779 I 0.000
RO3G_07751 Rhizopus oryzae RO3G_07751 I 0.000
Sakowv30031460m.g Saccoglossus kowalevskii Sakowv30031460m.g N 0.000
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.000
SELMODRAFT_8183 Selaginella moellendorffii SELMODRAFT_8183 I 0.000
SMAR009325 Strigamia maritima SMAR009325 N 0.000
SMAR010283 Strigamia maritima SMAR010283 N 0.000
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.000
SVUK_0000686401 Strongylus vulgaris SVUK_0000686401 N 0.000
TCLT_0000189901 Thelazia callipaeda TCLT_0000189901 N 0.000
TCM_014800 Theobroma cacao TCM_014800 N 0.000
TELCIR_19210 Teladorsagia circumcincta TELCIR_19210 N 0.000
TELCIR_25179 Teladorsagia circumcincta TELCIR_25179 N 0.000
TMUE_s0089001400 Trichuris muris TMUE_s0089001400 N 0.000
TMUE_s0227000300 Trichuris muris TMUE_s0227000300 N 0.000
WBGene00237022 Onchocerca volvulus WBGene00237022 N 0.000
WBGene00238178 Onchocerca volvulus WBGene00238178 N 0.000
WUBG_00348 Wuchereria bancrofti WUBG_00348 N 0.000