Phatr3_J45559 (Phaeodactylum tricornutum)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Phatr3_J45559 T241716_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.354 0.326
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.354 0.326
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Phatr3_J45559.p1 HSF 100 201

Links

Other HSF family TFs
Other Phaeodactylum tricornutum TFs

258 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Phatr3_J45560 Phaeodactylum tricornutum Phatr3_J45560 I 0.506
HSF1 Phaeodactylum tricornutum Phatr3_J44099 N 0.415
Phatr3_J45926 Phaeodactylum tricornutum Phatr3_J45926 N 0.407
Thaps264036 Thalassiosira pseudonana Thaps264036 N 0.402
Phatr3_EG02327 Phaeodactylum tricornutum Phatr3_EG02327 N 0.391
Thaps22414 Thalassiosira pseudonana Thaps22414 N 0.379
TCM_020700 Theobroma cacao TCM_020700 I 0.376
gw1.21.273.1 Fragilariopsis cylindrus gw1.21.273.1 N 0.367
Gorai.006G242400 Gossypium raimondii Gorai.006G242400 I 0.364
POPTR_0010s09210 Populus trichocarpa POPTR_0010s09210 I 0.363
SapurV1A.0238s0150 Salix purpurea SapurV1A.0238s0150 I 0.363
SapurV1A.3703s0010 Salix purpurea SapurV1A.3703s0010 I 0.363
orange1.1g018107m.g Citrus sinensis orange1.1g018107m.g I 0.360
Gorai.011G168400 Gossypium raimondii Gorai.011G168400 I 0.358
Thaps25112 Thalassiosira pseudonana Thaps25112 N 0.356
Thhalv10020829m.g Eutrema salsugineum Thhalv10020829m.g I 0.355
Thaps262668 Thalassiosira pseudonana Thaps262668 N 0.355
SapurV1A.0350s0180 Salix purpurea SapurV1A.0350s0180 I 0.354
Carubv10013808m.g Capsella rubella Carubv10013808m.g I 0.354
HSFA6B Arabidopsis thaliana AT3G22830 D 0.354
AT-HSFA6B Arabidopsis lyrata fgenesh2_kg.3__2495__AT3G22830.1 I 0.353
Bo5g093470 Brassica oleracea Bo5g093470 I 0.353
Bra033913 Brassica rapa Bra033913 I 0.353
29844.m003222 Ricinus communis 29844.m003222 I 0.352
Thaps269233 Thalassiosira pseudonana Thaps269233 N 0.352
POPTR_0008s15740 Populus trichocarpa POPTR_0008s15740 I 0.352
MDP0000119199 Malus domestica MDP0000119199 I 0.352
Bra001885 Brassica rapa Bra001885 I 0.351
Bo3g081420 Brassica oleracea Bo3g081420 I 0.351
evm.TU.supercontig_44.122 Carica papaya evm.TU.supercontig_44.122 I 0.351
Bostr.19424s0375 Boechera stricta Bostr.19424s0375 I 0.351
BRADI1G55630 Brachypodium distachyon BRADI1G55630 I 0.350
GSMUA_Achr8G20520_001 Musa acuminata GSMUA_Achr8G20520_001 I 0.349
Phatr3_J45206 Phaeodactylum tricornutum Phatr3_J45206 N 0.349
Bra023800 Brassica rapa Bra023800 I 0.347
chr5.CM0357.390.nc Lotus japonicus chr5.CM0357.390.nc I 0.347
HSF1 Arabidopsis lyrata fgenesh2_kg.7__2533__AT4G17750.1 I 0.347
Phatr3_J31764 Phaeodactylum tricornutum Phatr3_J31764 N 0.345
Traes_2BS_1484A7516 Triticum aestivum Traes_2BS_1484A7516 I 0.345
BRADI1G69407 Brachypodium distachyon BRADI1G69407 I 0.344
MDP0000319910 Malus domestica MDP0000319910 I 0.344
gene20347-v1.0-hybrid Fragaria vesca gene20347-v1.0-hybrid I 0.344
VIT_02s0012g01810 Vitis vinifera VIT_02s0012g01810 I 0.344
MDP0000273175 Malus domestica MDP0000273175 I 0.344
MDP0000253499 Malus domestica MDP0000253499 I 0.344
cassava18146.valid.m1 Manihot esculenta cassava18146.valid.m1 I 0.343
Thaps11148 Thalassiosira pseudonana Thaps11148 N 0.342
Ciclev10006902m.g Citrus clementina Ciclev10006902m.g I 0.342
MLOC_69675 Hordeum vulgare MLOC_69675 I 0.341
F775_04438 Aegilops tauschii F775_04438 I 0.341
Gorai.004G076900 Gossypium raimondii Gorai.004G076900 I 0.341
Cagra.4553s0008 Capsella grandiflora Cagra.4553s0008 I 0.340
PRUPE_ppa010224mg Prunus persica PRUPE_ppa010224mg I 0.340
cassava3334.m1 Manihot esculenta cassava3334.m1 I 0.340
Carubv10026734m.g Capsella rubella Carubv10026734m.g I 0.340
PRUPE_ppa1027143mg Prunus persica PRUPE_ppa1027143mg I 0.340
Pm009237 Prunus mume Pm009237 I 0.340
gene29004-v1.0-hybrid Fragaria vesca gene29004-v1.0-hybrid I 0.340
MTR_1g061170 Medicago truncatula MTR_1g061170 I 0.339
cassava35362.valid.m1 Manihot esculenta cassava35362.valid.m1 I 0.339
Thaps5010 Thalassiosira pseudonana Thaps5010 N 0.339
e_gw1.20.00.75.1 Ostreococcus tauri e_gw1.20.00.75.1 I 0.339
OGLUM02G19090 Oryza glumaepatula OGLUM02G19090 I 0.338
ONIVA02G20850 Oryza nivara ONIVA02G20850 I 0.338
HSFA3 Oryza sativa OS02G0527300 I 0.338
OSTLU_8561 Ostreococcus lucimarinus OSTLU_8561 I 0.338
OBART02G18800 Oryza barthii OBART02G18800 I 0.338
chr5.CM0024.490.nc Lotus japonicus chr5.CM0024.490.nc I 0.338
OMERI02G18820 Oryza meridionalis OMERI02G18820 I 0.338
ORGLA02G0162000 Oryza glaberrima ORGLA02G0162000 I 0.338
ORUFI02G19790 Oryza rufipogon ORUFI02G19790 I 0.338
BGIOSGA006348 Oryza indica BGIOSGA006348 I 0.338
Pm020253 Prunus mume Pm020253 I 0.337
Bo1g103760 Brassica oleracea Bo1g103760 I 0.337
Cucsa.016480 Cucumis sativus Cucsa.016480 I 0.337
SapurV1A.0376s0080 Salix purpurea SapurV1A.0376s0080 I 0.337
evm.TU.supercontig_27.46 Carica papaya evm.TU.supercontig_27.46 I 0.336
Cla009775 Citrullus lanatus Cla009775 I 0.336
Cla006127 Citrullus lanatus Cla006127 I 0.336
Ca_07800 Cicer arietinum Ca_07800 I 0.336
Eucgr.E00253 Eucalyptus grandis Eucgr.E00253 I 0.336
Ciclev10011531m.g Citrus clementina Ciclev10011531m.g I 0.336
orange1.1g011077m.g Citrus sinensis orange1.1g011077m.g I 0.336
Solyc09g009100.2 Solanum lycopersicum Solyc09g009100.2 I 0.336
PGSC0003DMG401002683 Solanum tuberosum PGSC0003DMG401002683 I 0.335
orange1.1g046676m.g Citrus sinensis orange1.1g046676m.g I 0.335
Lus10039376.g Linum usitatissimum Lus10039376.g I 0.335
VIT_00s0179g00150 Vitis vinifera VIT_00s0179g00150 I 0.334
POPTR_0006s11680 Populus trichocarpa POPTR_0006s11680 I 0.334
SELMODRAFT_110881 Selaginella moellendorffii SELMODRAFT_110881 I 0.333
GSMUA_Achr6G24430_001 Musa acuminata GSMUA_Achr6G24430_001 I 0.333
GRMZM2G132971 Zea mays GRMZM2G132971 I 0.333
SELMODRAFT_107503 Selaginella moellendorffii SELMODRAFT_107503 I 0.333
e_gw1.21.303.1 Fragilariopsis cylindrus e_gw1.21.303.1 N 0.333
Gorai.006G158000 Gossypium raimondii Gorai.006G158000 I 0.333
Phatr3_J48361 Phaeodactylum tricornutum Phatr3_J48361 N 0.332
TRAES3BF025700040CFD_g Triticum aestivum TRAES3BF025700040CFD_g I 0.332
Cucsa.212820 Cucumis sativus Cucsa.212820 I 0.332
orange1.1g017694m.g Citrus sinensis orange1.1g017694m.g I 0.332
Ciclev10020718m.g Citrus clementina Ciclev10020718m.g I 0.332
Cla019941 Citrullus lanatus Cla019941 I 0.330
OPUNC07G04790 Oryza punctata OPUNC07G04790 I 0.330
29883.m001955 Ricinus communis 29883.m001955 I 0.330
Gorai.003G053300 Gossypium raimondii Gorai.003G053300 I 0.330
gene02408-v1.0-hybrid Fragaria vesca gene02408-v1.0-hybrid I 0.330
GLYMA05G28460 Glycine max GLYMA05G28460 I 0.330
GLYMA03G31381 Glycine max GLYMA03G31381 I 0.330
Thaps12066 Thalassiosira pseudonana Thaps12066 N 0.329
Sb04g021490 Sorghum bicolor Sb04g021490 I 0.329
Si016943m.g Setaria italica Si016943m.g I 0.329
MTR_1g071360 Medicago truncatula MTR_1g071360 I 0.329
GSMUA_Achr1G27200_001 Musa acuminata GSMUA_Achr1G27200_001 I 0.329
GRMZM2G059851 Zea mays GRMZM2G059851 I 0.329
Pavir.Ab01320 Panicum virgatum Pavir.Ab01320 I 0.329
BRADI3G44700 Brachypodium distachyon BRADI3G44700 I 0.329
Bo9g181780 Brassica oleracea Bo9g181780 I 0.329
Thaps22932 Thalassiosira pseudonana Thaps22932 N 0.328
MDP0000155579 Malus domestica MDP0000155579 I 0.328
Pavir.Ba03710 Panicum virgatum Pavir.Ba03710 I 0.328
Thaps10613 Thalassiosira pseudonana Thaps10613 N 0.328
Aquca_009_00974 Aquilegia coerulea Aquca_009_00974 I 0.328
evm.TU.supercontig_52.116 Carica papaya evm.TU.supercontig_52.116 I 0.328
Pavir.J18081 Panicum virgatum Pavir.J18081 I 0.328
TCM_004275 Theobroma cacao TCM_004275 I 0.328
OPUNC02G16840 Oryza punctata OPUNC02G16840 I 0.328
GRMZM2G125969 Zea mays GRMZM2G125969 I 0.328
LPERR02G15050 Leersia perrieri LPERR02G15050 I 0.328
Si030256m.g Setaria italica Si030256m.g I 0.328
MLOC_75519 Hordeum vulgare MLOC_75519 I 0.328
GLYMA10G03530 Glycine max GLYMA10G03530 I 0.328
29092.m000454 Ricinus communis 29092.m000454 I 0.327
Pm013905 Prunus mume Pm013905 I 0.327
HSFA2B Oryza sativa OS07G0178600 I 0.327
Bo1g017810 Brassica oleracea Bo1g017810 I 0.327
Bra040179 Brassica rapa Bra040179 I 0.327
ORUFI07G04770 Oryza rufipogon ORUFI07G04770 I 0.327
OMERI07G03500 Oryza meridionalis OMERI07G03500 I 0.327
Bostr.30275s0239 Boechera stricta Bostr.30275s0239 I 0.327
OBART07G04960 Oryza barthii OBART07G04960 I 0.327
OGLUM07G04480 Oryza glumaepatula OGLUM07G04480 I 0.327
OLONG_011402 Oryza longistaminata OLONG_011402 I 0.327
BGIOSGA025247 Oryza indica BGIOSGA025247 I 0.327
ONIVA07G03730 Oryza nivara ONIVA07G03730 I 0.327
ORGLA07G0042500 Oryza glaberrima ORGLA07G0042500 I 0.327
AMTR_s00069p00130920 Amborella trichopoda AMTR_s00069p00130920 I 0.327
PRUPE_ppa015468mg Prunus persica PRUPE_ppa015468mg I 0.327
TCM_022446 Theobroma cacao TCM_022446 I 0.327
HSFA1A Arabidopsis thaliana AT4G17750 I 0.327
PDK_20s1342122g001 Phoenix dactylifera PDK_20s1342122g001 I 0.327
Solyc08g005170.2 Solanum lycopersicum Solyc08g005170.2 I 0.326
30054.m000802 Ricinus communis 30054.m000802 I 0.326
PK05866.1 Cannabis sativa PK05866.1 I 0.326
GLYMA10G07620 Glycine max GLYMA10G07620 I 0.326
Cucsa.321980 Cucumis sativus Cucsa.321980 I 0.326
gene30146-v1.0-hybrid Fragaria vesca gene30146-v1.0-hybrid I 0.326
Aquca_017_00542 Aquilegia coerulea Aquca_017_00542 I 0.326
GLYMA01G34490 Glycine max GLYMA01G34490 I 0.326
AMTR_s00040p00209530 Amborella trichopoda AMTR_s00040p00209530 I 0.326
gene13904-v1.0-hybrid Fragaria vesca gene13904-v1.0-hybrid I 0.326
Sb01g046350 Sorghum bicolor Sb01g046350 I 0.326
PRUPE_ppa004782mg Prunus persica PRUPE_ppa004782mg I 0.326
PGSC0003DMG400017846 Solanum tuberosum PGSC0003DMG400017846 I 0.326
Bra009515 Brassica rapa Bra009515 I 0.326
Cla008974 Citrullus lanatus Cla008974 I 0.326
Pm026236 Prunus mume Pm026236 I 0.325
BRADI3G26920 Brachypodium distachyon BRADI3G26920 I 0.325
Pm023178 Prunus mume Pm023178 I 0.325
Lus10000312.g Linum usitatissimum Lus10000312.g I 0.325
PRUPE_ppa015602mg Prunus persica PRUPE_ppa015602mg I 0.324
SELMODRAFT_109000 Selaginella moellendorffii SELMODRAFT_109000 I 0.324
Gorai.003G183900 Gossypium raimondii Gorai.003G183900 I 0.324
SELMODRAFT_93081 Selaginella moellendorffii SELMODRAFT_93081 I 0.324
GSMUA_Achr2G21640_001 Musa acuminata GSMUA_Achr2G21640_001 I 0.324
Gorai.008G225200 Gossypium raimondii Gorai.008G225200 I 0.324
AMTR_s00048p00075850 Amborella trichopoda AMTR_s00048p00075850 I 0.324
MTR_1g102860 Medicago truncatula MTR_1g102860 I 0.324
orange1.1g010166m.g Citrus sinensis orange1.1g010166m.g I 0.324
cassava14443.m1 Manihot esculenta cassava14443.m1 I 0.324
MTR_2g100680 Medicago truncatula MTR_2g100680 I 0.324
Thhalv10003365m.g Eutrema salsugineum Thhalv10003365m.g I 0.324
Lus10040091.g Linum usitatissimum Lus10040091.g I 0.324
Lus10014698.g Linum usitatissimum Lus10014698.g I 0.324
TCM_016563 Theobroma cacao TCM_016563 I 0.324
Eucgr.K03325 Eucalyptus grandis Eucgr.K03325 I 0.323
SapurV1A.0208s0230 Salix purpurea SapurV1A.0208s0230 I 0.323
GLYMA13G21490 Glycine max GLYMA13G21490 I 0.323
HSFA3 Arabidopsis thaliana AT5G03720 I 0.323
ATHSFA1D Arabidopsis lyrata fgenesh2_kg.1__3374__AT1G32330.1 I 0.323
Lus10030956.g Linum usitatissimum Lus10030956.g I 0.323
Lus10011065.g Linum usitatissimum Lus10011065.g I 0.323
Gorai.007G139600 Gossypium raimondii Gorai.007G139600 I 0.323
Thhalv10013758m.g Eutrema salsugineum Thhalv10013758m.g I 0.323
Carubv10001065m.g Capsella rubella Carubv10001065m.g I 0.323
POPTR_0014s13780 Populus trichocarpa POPTR_0014s13780 I 0.323
Bostr.3359s0126 Boechera stricta Bostr.3359s0126 I 0.323
Aquca_005_00532 Aquilegia coerulea Aquca_005_00532 I 0.323
AT-HSFA3 Arabidopsis lyrata scaffold_600303.1 I 0.323
cassava24591.valid.m1 Manihot esculenta cassava24591.valid.m1 I 0.323
cassava44107.valid.m1 Manihot esculenta cassava44107.valid.m1 I 0.323
POPTR_0002s04900 Populus trichocarpa POPTR_0002s04900 I 0.323
cassava44108.valid.m1 Manihot esculenta cassava44108.valid.m1 I 0.323
Ca_11487 Cicer arietinum Ca_11487 I 0.323
Cagra.0154s0031 Capsella grandiflora Cagra.0154s0031 I 0.323
ONIVA10G09550 Oryza nivara ONIVA10G09550 I 0.322
Thhalv10025116m.g Eutrema salsugineum Thhalv10025116m.g I 0.322
MTR_7g095680 Medicago truncatula MTR_7g095680 I 0.322
OMERI10G07540 Oryza meridionalis OMERI10G07540 I 0.322
ORGLA10G0088100 Oryza glaberrima ORGLA10G0088100 I 0.322
ORUFI10G10710 Oryza rufipogon ORUFI10G10710 I 0.322
BGIOSGA031910 Oryza indica BGIOSGA031910 I 0.322
Pavir.Ib03391 Panicum virgatum Pavir.Ib03391 I 0.322
POPTR_0003s09370 Populus trichocarpa POPTR_0003s09370 I 0.322
SapurV1A.0852s0050 Salix purpurea SapurV1A.0852s0050 I 0.322
OPUNC10G08860 Oryza punctata OPUNC10G08860 I 0.322
OLONG_017397 Oryza longistaminata OLONG_017397 I 0.322
GLYMA09G33920 Glycine max GLYMA09G33920 I 0.322
PK25112.1 Cannabis sativa PK25112.1 I 0.322
MLOC_498 Hordeum vulgare MLOC_498 I 0.322
LPERR10G07380 Leersia perrieri LPERR10G07380 I 0.322
evm.TU.supercontig_90.16 Carica papaya evm.TU.supercontig_90.16 I 0.322
Si036304m.g Setaria italica Si036304m.g I 0.322
Si035840m.g Setaria italica Si035840m.g I 0.322
MTR_8g083100 Medicago truncatula MTR_8g083100 I 0.322
OB10G18020 Oryza brachyantha OB10G18020 I 0.322
Sb01g021490 Sorghum bicolor Sb01g021490 I 0.322
chr1.CM0322.130.nc Lotus japonicus chr1.CM0322.130.nc I 0.322
Gorai.006G224000 Gossypium raimondii Gorai.006G224000 I 0.322
GLYMA13G29760 Glycine max GLYMA13G29760 I 0.322
HSFA2C Oryza sativa OS10G0419300 I 0.322
OGLUM10G10060 Oryza glumaepatula OGLUM10G10060 I 0.322
GLYMA19G34210 Glycine max GLYMA19G34210 I 0.322
GRMZM2G118485 Zea mays GRMZM2G118485 I 0.322
Bostr.2128s0078 Boechera stricta Bostr.2128s0078 I 0.322
OBART10G10150 Oryza barthii OBART10G10150 I 0.322
HSFA1D Arabidopsis thaliana AT1G32330 I 0.321
chr6.CM0118.920.nd Lotus japonicus chr6.CM0118.920.nd I 0.321
SapurV1A.3395s0010 Salix purpurea SapurV1A.3395s0010 I 0.321
GLYMA10G00560 Glycine max GLYMA10G00560 I 0.321
Bra017595 Brassica rapa Bra017595 I 0.321
mgf018900m Mimulus guttatus mgf018900m I 0.321
Bo9g062710 Brassica oleracea Bo9g062710 I 0.321
GSMUA_Achr4G17040_001 Musa acuminata GSMUA_Achr4G17040_001 I 0.320
SapurV1A.0053s0820 Salix purpurea SapurV1A.0053s0820 I 0.320
chr4.CM0042.1510.nc Lotus japonicus chr4.CM0042.1510.nc I 0.319
Bostr.26833s0037 Boechera stricta Bostr.26833s0037 I 0.319
Thaps22135 Thalassiosira pseudonana Thaps22135 N 0.319
GSMUA_Achr9G01640_001 Musa acuminata GSMUA_Achr9G01640_001 I 0.319
Bostr.3148s0085 Boechera stricta Bostr.3148s0085 I 0.319
Cucsa.378560 Cucumis sativus Cucsa.378560 I 0.319
PRUPE_ppa004559mg Prunus persica PRUPE_ppa004559mg I 0.319
AT-HSFA6A Arabidopsis lyrata fgenesh1_pg.C_scaffold_8000489 I 0.319
Cla018003 Citrullus lanatus Cla018003 I 0.319
Pm011227 Prunus mume Pm011227 I 0.319
POPTR_0004s04260 Populus trichocarpa POPTR_0004s04260 I 0.319
GLYMA10G38930 Glycine max GLYMA10G38930 I 0.319
POPTR_0005s23640 Populus trichocarpa POPTR_0005s23640 I 0.319
cassava3540.m1 Manihot esculenta cassava3540.m1 I 0.319
evm.TU.supercontig_124.4 Carica papaya evm.TU.supercontig_124.4 I 0.318