CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.21.303.1
(
Fragilariopsis cylindrus
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
e_gw1.21.303.1
T242776_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.21.303.1
HSF
44
134
FPLKLYVILAQHEFQDIIGWMPHGRSWKVHKPNLFETRIMPMFFEYSNYHSFNRLVNAWSFRRVSSGVDRGSYYHELFLRGKPYLHKFMRR
Links
Other
HSF
family TFs
Other
Fragilariopsis cylindrus
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phatr3_EG02327
Phaeodactylum tricornutum
Phatr3_EG02327
N
0.491
gw1.21.273.1
Fragilariopsis cylindrus
gw1.21.273.1
N
0.480
Thaps25112
Thalassiosira pseudonana
Thaps25112
N
0.377
Phatr3_J48667
Phaeodactylum tricornutum
Phatr3_J48667
N
0.375
HSF1
Phaeodactylum tricornutum
Phatr3_J44099
N
0.374
Thaps264072
Thalassiosira pseudonana
Thaps264072
N
0.369
Phatr3_J45926
Phaeodactylum tricornutum
Phatr3_J45926
N
0.367
Thaps262668
Thalassiosira pseudonana
Thaps262668
N
0.358
Thaps22414
Thalassiosira pseudonana
Thaps22414
N
0.357
estExt_Genewise1Plus.C_91152
Fragilariopsis cylindrus
estExt_Genewise1Plus.C_91152
I
0.349
Thaps12066
Thalassiosira pseudonana
Thaps12066
N
0.349
Thaps22570
Thalassiosira pseudonana
Thaps22570
I
0.348
Thaps8215
Thalassiosira pseudonana
Thaps8215
N
0.346
Phatr3_J49596
Phaeodactylum tricornutum
Phatr3_J49596
N
0.344
Phatr3_J45206
Phaeodactylum tricornutum
Phatr3_J45206
N
0.341
Thaps6958
Thalassiosira pseudonana
Thaps6958
N
0.339
Thaps264036
Thalassiosira pseudonana
Thaps264036
N
0.338
Phatr3_J45560
Phaeodactylum tricornutum
Phatr3_J45560
I
0.337
estExt_fgenesh2_pg.C_40667
Fragilariopsis cylindrus
estExt_fgenesh2_pg.C_40667
N
0.334
Phatr3_J48361
Phaeodactylum tricornutum
Phatr3_J48361
N
0.334
Phatr3_J39785
Phaeodactylum tricornutum
Phatr3_J39785
N
0.333
Phatr3_J45559
Phaeodactylum tricornutum
Phatr3_J45559
I
0.333
Phatr3_EG00672
Phaeodactylum tricornutum
Phatr3_EG00672
N
0.330
gw1.27.181.1
Fragilariopsis cylindrus
gw1.27.181.1
N
0.329
Phatr3_Jdraft1650
Phaeodactylum tricornutum
Phatr3_Jdraft1650
N
0.329
Phatr3_J31764
Phaeodactylum tricornutum
Phatr3_J31764
N
0.329
Thaps269233
Thalassiosira pseudonana
Thaps269233
N
0.328
e_gw1.5.1185.1
Fragilariopsis cylindrus
e_gw1.5.1185.1
N
0.328
e_gw1.2.349.1
Fragilariopsis cylindrus
e_gw1.2.349.1
N
0.327
Thaps9607
Thalassiosira pseudonana
Thaps9607
N
0.327
Thaps11148
Thalassiosira pseudonana
Thaps11148
N
0.327
Phatr3_J49170
Phaeodactylum tricornutum
Phatr3_J49170
N
0.327
Phatr3_EG01965
Phaeodactylum tricornutum
Phatr3_EG01965
N
0.326
Phatr3_J44684
Phaeodactylum tricornutum
Phatr3_J44684
N
0.326
Thaps22932
Thalassiosira pseudonana
Thaps22932
N
0.325
Phatr3_J45393
Phaeodactylum tricornutum
Phatr3_J45393
N
0.323
Phatr3_J39786
Phaeodactylum tricornutum
Phatr3_J39786
N
0.323
gw1.90.39.1
Fragilariopsis cylindrus
gw1.90.39.1
N
0.321
Phatr3_J48558
Phaeodactylum tricornutum
Phatr3_J48558
N
0.319
Phatr3_J47952
Phaeodactylum tricornutum
Phatr3_J47952
N
0.318