Thaps22570 (Thalassiosira pseudonana)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Thaps22570 T242218_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF1
M00060_2.00 		Saccharomyces cerevisiae
NNNTTCNNN
NNNGAANNN		 PBM
Badis et al.(2008)
HSF1_4530 		0.333 0.427
HSF1
M07489_2.00 		Saccharomyces cerevisiae
HVTTCCAT
ATGGAABD		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0319.1 		0.333 0.427
HSF1
M08577_2.00 		Saccharomyces cerevisiae
TTCTAGAA
TTCTAGAA		 Misc
DeBoer et al.(2011)
YGL073W_1461 		0.333 0.427
HSF1
M08578_2.00 		Saccharomyces cerevisiae
GAANNNNNWRGAA
TTCYWNNNNNTTC		 Misc
DeBoer et al.(2011)
YGL073W_411 		0.333 0.427
HSF1
M08579_2.00 		Saccharomyces cerevisiae
HVTTCCAT
ATGGAABD		 Misc
DeBoer et al.(2011)
YGL073W_476 		0.333 0.427
HSF1
M08580_2.00 		Saccharomyces cerevisiae
RGAABNTTCTRGAA
TTCYAGAANVTTCY		 Misc
DeBoer et al.(2011)
YGL073W_615 		0.333 0.427
HSF1
M10874_2.00 		Saccharomyces cerevisiae
RGAANRGAANRGAAN
NTTCYNTTCYNTTCY		 Transfac
Matys et al.(2006)
F$HSF_02 		0.333 0.427
HSF1
M10875_2.00 		Saccharomyces cerevisiae
RGAANNTTCYNTTCY
RGAANRGAANNTTCY		 Transfac
Matys et al.(2006)
F$HSF_03 		0.333 0.427
HSF1
M10876_2.00 		Saccharomyces cerevisiae
RGAANNTTCYRGAAN
NTTCYRGAANNTTCY		 Transfac
Matys et al.(2006)
F$HSF_04 		0.333 0.427
HSF1
M10877_2.00 		Saccharomyces cerevisiae
NTTCYNTTCYRGAAN
NTTCYRGAANRGAAN		 Transfac
Matys et al.(2006)
F$HSF_05 		0.333 0.427
HSF1
M10878_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$HSF_Q6 		0.333 0.427
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thaps22570 HSF 95 187

Links

Other HSF family TFs
Other Thalassiosira pseudonana TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thaps264072 Thalassiosira pseudonana Thaps264072 N 0.441
Thaps264346 Thalassiosira pseudonana Thaps264346 I 0.432
Thaps12066 Thalassiosira pseudonana Thaps12066 N 0.417
Thaps9607 Thalassiosira pseudonana Thaps9607 N 0.415
gw1.21.273.1 Fragilariopsis cylindrus gw1.21.273.1 N 0.395
Phatr3_EG02327 Phaeodactylum tricornutum Phatr3_EG02327 N 0.390
Thaps264036 Thalassiosira pseudonana Thaps264036 N 0.384
Phatr3_J49594 Phaeodactylum tricornutum Phatr3_J49594 I 0.381
Thaps22135 Thalassiosira pseudonana Thaps22135 N 0.375
Thaps264590 Thalassiosira pseudonana Thaps264590 N 0.368
Thaps8215 Thalassiosira pseudonana Thaps8215 N 0.365
Thaps11244 Thalassiosira pseudonana Thaps11244 N 0.364
HSF1 Phaeodactylum tricornutum Phatr3_J44099 N 0.361
Phatr3_J50481 Phaeodactylum tricornutum Phatr3_J50481 N 0.361
Thaps12116 Thalassiosira pseudonana Thaps12116 N 0.359
Thaps23803 Thalassiosira pseudonana Thaps23803 N 0.356
CAOG_06646 Capsaspora owczarzaki CAOG_06646 I 0.356
CAGL0H03443g Candida glabrata CAGL0H03443g I 0.355
Phatr3_J48667 Phaeodactylum tricornutum Phatr3_J48667 N 0.354
Thaps25112 Thalassiosira pseudonana Thaps25112 N 0.352
e_gw1.21.303.1 Fragilariopsis cylindrus e_gw1.21.303.1 N 0.348
e_gw1.2.1757.1 Fragilariopsis cylindrus e_gw1.2.1757.1 N 0.345
Thaps263978 Thalassiosira pseudonana Thaps263978 N 0.345
Thaps22932 Thalassiosira pseudonana Thaps22932 N 0.343
Phatr3_J39785 Phaeodactylum tricornutum Phatr3_J39785 N 0.341
Phatr3_EG02471 Phaeodactylum tricornutum Phatr3_EG02471 N 0.339
Phatr3_J31764 Phaeodactylum tricornutum Phatr3_J31764 N 0.337
Thaps269233 Thalassiosira pseudonana Thaps269233 N 0.337
SKUD_205711 Saccharomyces kudriavzevii SKUD_205711 I 0.336
SU7_1143 Saccharomyces arboricola SU7_1143 I 0.336
ZYRO0G08734g Zygosaccharomyces rouxii ZYRO0G08734g I 0.334
ZBAI_09737 Zygosaccharomyces bailii ZBAI_09737 I 0.334
Phatr3_J44917 Phaeodactylum tricornutum Phatr3_J44917 N 0.334
ZBAI_03930 Zygosaccharomyces bailii ZBAI_03930 I 0.334
7859_YGL073W Saccharomyces mikatae 7859_YGL073W I 0.333
8607_YGL073W Saccharomyces paradoxus 8607_YGL073W I 0.333
HSF1 Saccharomyces cerevisiae YGL073W D 0.333
Thaps8654 Thalassiosira pseudonana Thaps8654 I 0.332
Phatr3_J45926 Phaeodactylum tricornutum Phatr3_J45926 N 0.331
HSF2 Phaeodactylum tricornutum Phatr3_J55070 N 0.329
estExt_Genewise1Plus.C_130130 Fragilariopsis cylindrus estExt_Genewise1Plus.C_130130 N 0.329
e_gw1.2.349.1 Fragilariopsis cylindrus e_gw1.2.349.1 N 0.329
Thaps22414 Thalassiosira pseudonana Thaps22414 N 0.329
Thaps11148 Thalassiosira pseudonana Thaps11148 N 0.329
NDAI_0I01110 Naumovozyma dairenensis NDAI_0I01110 I 0.328
Ecym_2208 Eremothecium cymbalariae Ecym_2208 I 0.327
AGOS_AFL085C Ashbya gossypii AGOS_AFL085C I 0.325
AACERI_AaceriAFL085C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFL085C I 0.325
estExt_fgenesh2_pg.C_420088 Fragilariopsis cylindrus estExt_fgenesh2_pg.C_420088 I 0.324
Thaps262668 Thalassiosira pseudonana Thaps262668 N 0.324
TDEL_0E05170 Torulaspora delbrueckii TDEL_0E05170 I 0.324
KUCA_T00004695001 Kuraishia capsulata KUCA_T00004695001 I 0.324
Phatr3_J44586 Phaeodactylum tricornutum Phatr3_J44586 N 0.323
Thaps24636 Thalassiosira pseudonana Thaps24636 N 0.322
Phatr3_J47952 Phaeodactylum tricornutum Phatr3_J47952 N 0.321
7991_YGL073W Saccharomyces bayanus 7991_YGL073W I 0.321
Phatr3_J48558 Phaeodactylum tricornutum Phatr3_J48558 N 0.320
ENSFALG00000011294 Ficedula albicollis ENSFALG00000011294 I 0.320
Phatr3_J43363 Phaeodactylum tricornutum Phatr3_J43363 N 0.320
YALI0_E13948g Yarrowia lipolytica YALI0_E13948g I 0.320
HSF2 Taeniopygia guttata ENSTGUG00000011838 I 0.320
gw1.1.2017.1 Fragilariopsis cylindrus gw1.1.2017.1 N 0.319
HPODL_00106 Ogataea parapolymorpha HPODL_00106 I 0.318