CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.2.1757.1
(
Fragilariopsis cylindrus
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
e_gw1.2.1757.1
T242777_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.2.1757.1
HSF
9
104
FPEKLHRLLVEVEAAGRADVISFVANGRAFAIHKADNFFKEIVPLYFRQSRLSSFKRQLNLYGFELINTGPARGGYYHELFVKVRPELCRRMRRVA
Links
Other
HSF
family TFs
Other
Fragilariopsis cylindrus
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phatr3_J43363
Phaeodactylum tricornutum
Phatr3_J43363
N
0.498
e_gw1.2.349.1
Fragilariopsis cylindrus
e_gw1.2.349.1
N
0.412
Phatr3_J43364
Phaeodactylum tricornutum
Phatr3_J43364
N
0.384
Phatr3_J45392
Phaeodactylum tricornutum
Phatr3_J45392
N
0.376
Phatr3_J49594
Phaeodactylum tricornutum
Phatr3_J49594
I
0.371
estExt_Genewise1Plus.C_130130
Fragilariopsis cylindrus
estExt_Genewise1Plus.C_130130
N
0.367
Phatr3_J48667
Phaeodactylum tricornutum
Phatr3_J48667
N
0.367
Phatr3_J44917
Phaeodactylum tricornutum
Phatr3_J44917
N
0.364
Phatr3_J45393
Phaeodactylum tricornutum
Phatr3_J45393
N
0.360
Phatr3_EG00322
Phaeodactylum tricornutum
Phatr3_EG00322
N
0.360
HSF2
Phaeodactylum tricornutum
Phatr3_J55070
N
0.346
Thaps22570
Thalassiosira pseudonana
Thaps22570
I
0.345
Phatr3_EG01933
Phaeodactylum tricornutum
Phatr3_EG01933
N
0.341
Phatr3_EG00212
Phaeodactylum tricornutum
Phatr3_EG00212
N
0.338
Phatr3_J45391
Phaeodactylum tricornutum
Phatr3_J45391
N
0.338
Thaps23801
Thalassiosira pseudonana
Thaps23801
N
0.338
Phatr3_J50622
Phaeodactylum tricornutum
Phatr3_J50622
N
0.338
Phatr3_J48394
Phaeodactylum tricornutum
Phatr3_J48394
N
0.337
Thaps6958
Thalassiosira pseudonana
Thaps6958
N
0.335
estExt_fgenesh2_pg.C_500047
Branchiostoma floridae
estExt_fgenesh2_pg.C_500047
I
0.330
estExt_fgenesh2_pg.C_70302
Branchiostoma floridae
estExt_fgenesh2_pg.C_70302
I
0.330
estExt_Genewise1Plus.C_91152
Fragilariopsis cylindrus
estExt_Genewise1Plus.C_91152
I
0.328
Phatr3_J48361
Phaeodactylum tricornutum
Phatr3_J48361
N
0.326
Thaps22454
Thalassiosira pseudonana
Thaps22454
I
0.326
fgenesh2_kg.1_#_319_#_2595_1_CCUX_EXTA
Fragilariopsis cylindrus
fgenesh2_kg.1_#_319_#_2595_1_CCUX_EXTA
N
0.325
gw1.1.2017.1
Fragilariopsis cylindrus
gw1.1.2017.1
N
0.324
Phatr3_J49596
Phaeodactylum tricornutum
Phatr3_J49596
N
0.324
estExt_fgenesh2_pg.C_420088
Fragilariopsis cylindrus
estExt_fgenesh2_pg.C_420088
I
0.324
Phatr3_J34415
Phaeodactylum tricornutum
Phatr3_J34415
I
0.322
Phatr3_J49567
Phaeodactylum tricornutum
Phatr3_J49567
N
0.322
Thaps12066
Thalassiosira pseudonana
Thaps12066
N
0.322
Thaps264072
Thalassiosira pseudonana
Thaps264072
N
0.322
Phatr3_EG02471
Phaeodactylum tricornutum
Phatr3_EG02471
N
0.320