CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_kg.1_#_319_#_2595_1_CCUX_EXTA
(
Fragilariopsis cylindrus
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
fgenesh2_kg.1_#_319_#_2595_1_CCUX_EXTA
T242861_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.1_#_319_#_2595_1_CCUX_EXTA
HSF
29
129
FARRLYEMLQSESKLAITSPNQTVFISWSESGLAFRIHDVDGFTSSVLPKYFRTKKFSSFQRNLNLYGFAKMRRGPDTDKYAHQSFTRGNPELLLHIRKSS
Links
Other
HSF
family TFs
Other
Fragilariopsis cylindrus
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phatr3_J43051
Phaeodactylum tricornutum
Phatr3_J43051
N
0.391
Thaps3698
Thalassiosira pseudonana
Thaps3698
N
0.374
Phatr3_J43364
Phaeodactylum tricornutum
Phatr3_J43364
N
0.359
Phatr3_J44586
Phaeodactylum tricornutum
Phatr3_J44586
N
0.356
Thaps8654
Thalassiosira pseudonana
Thaps8654
I
0.341
gw1.2.1206.1
Fragilariopsis cylindrus
gw1.2.1206.1
N
0.340
BN946_scf185014.g98
Trametes cinnabarina
BN946_scf185014.g98
I
0.340
Phatr3_J44917
Phaeodactylum tricornutum
Phatr3_J44917
N
0.340
gw1.22.133.1
Fragilariopsis cylindrus
gw1.22.133.1
N
0.336
e_gw1.2.349.1
Fragilariopsis cylindrus
e_gw1.2.349.1
N
0.335
M378DRAFT_74283
Amanita muscaria
M378DRAFT_74283
I
0.333
scaffold_600621.1
Arabidopsis lyrata
scaffold_600621.1
I
0.332
gw1.4.1286.1
Fragilariopsis cylindrus
gw1.4.1286.1
N
0.332
Phatr3_J49594
Phaeodactylum tricornutum
Phatr3_J49594
I
0.331
Phatr3_EG02471
Phaeodactylum tricornutum
Phatr3_EG02471
N
0.331
Phatr3_EG01933
Phaeodactylum tricornutum
Phatr3_EG01933
N
0.331
Phatr3_J49566
Phaeodactylum tricornutum
Phatr3_J49566
N
0.329
Thaps22932
Thalassiosira pseudonana
Thaps22932
N
0.328
M378DRAFT_164255
Amanita muscaria
M378DRAFT_164255
I
0.328
Phatr3_J48667
Phaeodactylum tricornutum
Phatr3_J48667
N
0.328
PHACADRAFT_264175
Phanerochaete carnosa
PHACADRAFT_264175
I
0.326
fgenesh1_pg.C_scaffold_3000687
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_3000687
I
0.326
BN946_scf184851.g74
Trametes cinnabarina
BN946_scf184851.g74
I
0.325
JAAARDRAFT_122806
Jaapia argillacea
JAAARDRAFT_122806
I
0.325
e_gw1.2.1757.1
Fragilariopsis cylindrus
e_gw1.2.1757.1
N
0.325
K443DRAFT_90832
Laccaria amethystina
K443DRAFT_90832
I
0.325
GYMLUDRAFT_144307
Gymnopus luxurians
GYMLUDRAFT_144307
N
0.324
PDE_09961
Penicillium oxalicum
PDE_09961
I
0.323
BOTBODRAFT_102648
Botryobasidium botryosum
BOTBODRAFT_102648
I
0.323
LACBIDRAFT_150048
Laccaria bicolor
LACBIDRAFT_150048
I
0.323
Phatr3_J49557
Phaeodactylum tricornutum
Phatr3_J49557
N
0.322
DICSQDRAFT_139749
Dichomitus squalens
DICSQDRAFT_139749
I
0.321
FIBRA_03155
Fibroporia radiculosa
FIBRA_03155
I
0.321
HSF2
Phaeodactylum tricornutum
Phatr3_J55070
N
0.321
CAOG_05916
Capsaspora owczarzaki
CAOG_05916
I
0.320
FOMPIDRAFT_1134545
Fomitopsis pinicola
FOMPIDRAFT_1134545
I
0.320
Thaps268481
Thalassiosira pseudonana
Thaps268481
N
0.319
scaffold_702873.1
Arabidopsis lyrata
scaffold_702873.1
I
0.319