CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10026981m.g
(
Eutrema salsugineum
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
Thhalv10026981m.g
T243429_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10026981m
HSF
3
92
VQVSADDLSSESIISWSKSNKNSIVWNQGEFHRKIISRAILCLNFSRFFSKLKEYVTFWICKIKRFVKIKGSMQSEFGHKEYFERIKRSI
Links
Other
HSF
family TFs
Other
Eutrema salsugineum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.20129s0193
Boechera stricta
Bostr.20129s0193
I
0.394
Carubv10021131m.g
Capsella rubella
Carubv10021131m.g
I
0.363
Cagra.0096s0075
Capsella grandiflora
Cagra.0096s0075
I
0.363
Thhalv10027510m.g
Eutrema salsugineum
Thhalv10027510m.g
I
0.351
scaffold_702441.1
Arabidopsis lyrata
scaffold_702441.1
I
0.343
Bra030021
Brassica rapa
Bra030021
I
0.342
Bra013406
Brassica rapa
Bra013406
I
0.328
Bra025635
Brassica rapa
Bra025635
I
0.325
Thhalv10026540m.g
Eutrema salsugineum
Thhalv10026540m.g
I
0.324
Bra002882
Brassica rapa
Bra002882
I
0.322
Bo4g139200
Brassica oleracea
Bo4g139200
I
0.320