CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVE_1155700
(
Strongyloides venezuelensis
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
SVE_1155700
T243720_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hsf-1
M00682_2.00
Caenorhabditis elegans
TTCYAGAA
TTCTRGAA
PBM
Narasimhan et al.(2015)
pTH10796
0.406
0.615
HSF1
M03329_2.00
Homo sapiens
GAANVTTCBVGAA
TTCBVGAABNTTC
SELEX
Jolma et al.(2013)
HSF1_1
0.322
0.573
HSF1
M03330_2.00
Homo sapiens
GAANRTTCBAGAA
TTCTVGAAYNTTC
SELEX
Jolma et al.(2013)
HSF1_2
0.322
0.573
HSF1
M05523_2.00
Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB
SELEX
Yin et al.(2017)
HSF1_eDBD_HT-SELEX
0.322
0.573
HSF1
M05525_2.00
Homo sapiens
VGAANRTTCKVGAAN
NTTCBMGAAYNTTCB
SELEX
Yin et al.(2017)
HSF1_FL_HT-SELEX
0.322
0.573
HSF1
M07977_2.00
Homo sapiens
GDCSYGGGTTCRADYCCC
GGGRHTYGAACCCRSGHC
ChIP-seq
Gerstein et al.(2012)
HepG2_HSF1_Stanford
0.322
0.573
HSF1
M09230_2.00
Homo sapiens
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN
Misc
Kulakovskiy et al.(2013)
HSF1_HUMAN.H11MO.0.A
0.322
0.573
Hsf1
M09232_2.00
Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN
Misc
Kulakovskiy et al.(2013)
HSF1_MOUSE.H11MO.0.A
0.322
0.573
HSF1
M09592_2.00
Homo sapiens
NNBBCYRGAANNTTCYRGVV
BBCYRGAANNTTCYRGVVNN
Misc
Heinz et al.(2010)
HepG2-HSF1_GSE31477
0.322
0.573
Hsf1
M09593_2.00
Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN
Misc
Heinz et al.(2010)
Striatum-HSF1_GSE38000
0.322
0.573
HSF1
M10863_2.00
Homo sapiens
NGAAHNTTCY
RGAANDTTCN
Transfac
Matys et al.(2006)
V$HSF1_01
0.322
0.573
HSF1
M10864_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q5_01
0.322
0.573
HSF1
M10865_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q5
0.322
0.573
HSF1
M10866_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q6_01
0.322
0.573
HSF1
M10867_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q6
0.322
0.573
HSF1
M10868_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF_Q6
0.322
0.573
HSF1
M05524_2.00
Homo sapiens
RGAANRTTCYRGAWN
NWTCYRGAAYNTTCY
SELEX
Yin et al.(2017)
HSF1_eDBD_Methyl-HT-SELEX
0.322
0.573
HSF1
M05526_2.00
Homo sapiens
RGAANVTTCYRGAWN
NWTCYRGAABNTTCY
SELEX
Yin et al.(2017)
HSF1_FL_Methyl-HT-SELEX
0.322
0.573
HSFB2A
M00869_2.00
Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN
PBM
Franco-Zorrilla et al.(2014)
HSFB2A
0.322
0.448
HSFB2A
M06952_2.00
Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF6_col_a
0.322
0.448
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_1155700.1
HSF
36
139
FLIKLWNIVNDPNLDHIIEWDESGLSFHIKDPYAFCKEVLPLYFKHGNLNSCVRQLNMYGFRKITTIEKSSLIGCQNAGDNLEFSHTYFIRGRYDLLCNIKRKL
Links
Other
HSF
family TFs
Other
Strongyloides venezuelensis
TFs
134 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPAL_0000387400
Strongyloides papillosus
SPAL_0000387400
I
0.687
PTRK_0001079800
Parastrongyloides trichosuri
PTRK_0001079800
I
0.658
SSTP_0000347800
Strongyloides stercoralis
SSTP_0000347800
I
0.647
ASU_10106
Ascaris suum
ASU_10106
I
0.478
TCNE_0000949901
Toxocara canis
TCNE_0000949901
I
0.478
ALUE_0000801801
Ascaris lumbricoides
ALUE_0000801801
I
0.478
EVEC_0000124901
Enterobius vermicularis
EVEC_0000124901
I
0.473
SPAL_0001635100
Strongyloides papillosus
SPAL_0001635100
I
0.472
SVE_0431600
Strongyloides venezuelensis
SVE_0431600
I
0.470
SPAL_0000387600
Strongyloides papillosus
SPAL_0000387600
I
0.458
SVE_1156000
Strongyloides venezuelensis
SVE_1156000
I
0.456
PTRK_0000997100
Parastrongyloides trichosuri
PTRK_0000997100
I
0.455
ASIM_0001223701
Anisakis simplex
ASIM_0001223701
I
0.454
Minc16435
Meloidogyne incognita
Minc16435
I
0.451
SSTP_0000175600
Strongyloides stercoralis
SSTP_0000175600
I
0.451
GPLIN_000109700
Globodera pallida
GPLIN_000109700
I
0.449
GPLIN_000673800
Globodera pallida
GPLIN_000673800
I
0.449
BXY_0882000
Bursaphelenchus xylophilus
BXY_0882000
I
0.447
SMUV_0000043201
Syphacia muris
SMUV_0000043201
I
0.445
RSKR_0000052100
Rhabditophanes kr3021
RSKR_0000052100
I
0.443
MhA1_Contig1076.frz3.gene4
Meloidogyne hapla
MhA1_Contig1076.frz3.gene4
I
0.440
LOAG_08901
Loa loa
LOAG_08901
I
0.439
CBN21581
Caenorhabditis brenneri
CBN21581
I
0.433
CRE28338
Caenorhabditis remanei
CRE28338
I
0.433
DICVIV_08378
Dictyocaulus viviparus
DICVIV_08378
I
0.427
nLs.2.1.2.g08921
Litomosoides sigmodontis
nLs.2.1.2.g08921
I
0.425
HCOI00423400
Haemonchus contortus
HCOI00423400
I
0.424
HCOI00424600
Haemonchus contortus
HCOI00424600
I
0.424
ANCCAN_00795
Ancylostoma caninum
ANCCAN_00795
I
0.423
SVUK_0000175201
Strongylus vulgaris
SVUK_0000175201
I
0.423
ANCCEY_01944
Ancylostoma ceylanicum
ANCCEY_01944
I
0.423
TCLT_0000441901
Thelazia callipaeda
TCLT_0000441901
I
0.423
ACOC_0000071501
Angiostrongylus costaricensis
ACOC_0000071501
I
0.423
nAv.1.0.1.g08619
Acanthocheilonema viteae
nAv.1.0.1.g08619
I
0.420
BTMF_0001609701
Brugia timori
BTMF_0001609701
I
0.420
Bm6746
Brugia malayi
Bm6746
I
0.420
nOo.2.0.1.g06259
Onchocerca ochengi
nOo.2.0.1.g06259
I
0.420
WBGene00238233
Onchocerca volvulus
WBGene00238233
I
0.420
nDi.2.2.2.g05157
Dirofilaria immitis
nDi.2.2.2.g05157
I
0.420
EEL_0000787901
Elaeophora elaphi
EEL_0000787901
I
0.416
nRc.2.0.1.g30983
Romanomermis culicivorax
nRc.2.0.1.g30983
I
0.407
hsf-1
Caenorhabditis elegans
WBGene00002004
D
0.406
NBR_0001979501
Nippostrongylus brasiliensis
NBR_0001979501
I
0.405
SSTP_0000347500
Strongyloides stercoralis
SSTP_0000347500
N
0.404
snap_masked-nMf.1.1.scaf11979-processed-gene-0.4
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf11979-processed-gene-0.4
I
0.387
CapteG130381
Capitella teleta
CapteG130381
I
0.387
nRc.2.0.1.g38503
Romanomermis culicivorax
nRc.2.0.1.g38503
I
0.383
L898_g5106
Steinernema monticolum
L898_g5106
I
0.382
CGI_10007406
Crassostrea gigas
CGI_10007406
I
0.367
L889_g598
Steinernema feltiae
L889_g598
I
0.366
L893_g7030
Steinernema glaseri
L893_g7030
I
0.364
L596_g17815
Steinernema carpocapsae
L596_g17815
I
0.362
L892_g820
Steinernema scapterisci
L892_g820
I
0.362
DME_0000290701
Dracunculus medinensis
DME_0000290701
I
0.359
SMU15027452
Schmidtea mediterranea
SMU15027452
I
0.357
GPUH_0001175501
Gongylonema pulchrum
GPUH_0001175501
I
0.357
SMU15040594
Schmidtea mediterranea
SMU15040594
I
0.356
TTAC_0000632001
Hydatigera taeniaeformis
TTAC_0000632001
I
0.353
TASK_0000797901
Taenia asiatica
TASK_0000797901
I
0.352
TsM_000781300
Taenia solium
TsM_000781300
I
0.352
ECANG7_05196
Echinococcus canadensis
ECANG7_05196
I
0.350
EmuJ_000706200
Echinococcus multilocularis
EmuJ_000706200
I
0.350
HDID_0000861201
Hymenolepis diminuta
HDID_0000861201
I
0.350
HNAJ_0000846501
Hymenolepis nana
HNAJ_0000846501
I
0.348
HmN_000096600
Hymenolepis microstoma
HmN_000096600
I
0.347
HSF1
Callithrix jacchus
ENSCJAG00000021431
I
0.345
LotgiG214431
Lottia gigantea
LotgiG214431
I
0.344
hsf1.S
Xenopus laevis
XB-GENE-997146
I
0.341
XP_002942927
Xenopus tropicalis
XP_002942927
I
0.341
hsf1
Xenopus laevis
XB-GENE-997145
I
0.341
BXY_0893300
Bursaphelenchus xylophilus
BXY_0893300
I
0.340
hsf1
Danio rerio
ENSDARG00000008818
I
0.340
GLOINDRAFT_240353
Rhizophagus irregularis
GLOINDRAFT_240353
I
0.340
HSF1
Anolis carolinensis
ENSACAG00000012604
I
0.339
ENSLACG00000013265
Latimeria chalumnae
ENSLACG00000013265
I
0.338
gw1.24.267.1
Chlorella NC64A
gw1.24.267.1
I
0.337
MTR_0020s0020
Medicago truncatula
MTR_0020s0020
I
0.337
ENSLOCG00000007411
Lepisosteus oculatus
ENSLOCG00000007411
I
0.337
Pvit_18730
Pogona vitticeps
Pvit_18730
I
0.335
hsf1
Tetraodon nigroviridis
ENSTNIG00000018157
I
0.335
hsf1
Takifugu rubripes
ENSTRUG00000000233
I
0.334
RO3G_10499
Rhizopus oryzae
RO3G_10499
I
0.333
HSF1
Monodelphis domestica
ENSMODG00000010663
I
0.333
PNEG_02594
Pneumocystis murina
PNEG_02594
I
0.333
ENSXMAG00000001905
Xiphophorus maculatus
ENSXMAG00000001905
I
0.332
hsf1
Oryzias latipes
ENSORLG00000001699
I
0.331
V565_116890
Rhizoctonia solani
V565_116890
I
0.331
hsf1
Gasterosteus aculeatus
ENSGACG00000010434
I
0.329
WBGene00013134
Caenorhabditis elegans
WBGene00013134
I
0.329
ENSONIG00000015330
Oreochromis niloticus
ENSONIG00000015330
I
0.329
LDEC001032
Leptinotarsa decemlineata
LDEC001032
I
0.328
Sjc_0064040
Schistosoma japonicum
Sjc_0064040
I
0.327
HSF1
Procavia capensis
ENSPCAG00000006962
I
0.326
SROB_0000903601
Schistosoma rodhaini
SROB_0000903601
I
0.326
Smp_068270
Schistosoma mansoni
Smp_068270
I
0.326
ENSMLUG00000029200
Myotis lucifugus
ENSMLUG00000029200
I
0.325
Bo3g108110
Brassica oleracea
Bo3g108110
I
0.325
Bra010049
Brassica rapa
Bra010049
I
0.325
HSF1
Dasypus novemcinctus
ENSDNOG00000047071
I
0.324
ENSPFOG00000003038
Poecilia formosa
ENSPFOG00000003038
I
0.324
Ca_19774
Cicer arietinum
Ca_19774
I
0.324
MCOS_0000304601
Mesocestoides corti
MCOS_0000304601
N
0.324
HSF1
Sus scrofa
ENSSSCG00000005917
I
0.324
ENSAMXG00000012942
Astyanax mexicanus
ENSAMXG00000012942
I
0.323
HSF1
Bos taurus
ENSBTAG00000020751
I
0.323
HSF1
Echinops telfairi
ENSETEG00000002048
I
0.323
ENSMLUG00000002310
Myotis lucifugus
ENSMLUG00000002310
I
0.323
ENSOARG00000014186
Ovis aries
ENSOARG00000014186
I
0.323
HSF1
Ochotona princeps
ENSOPRG00000004863
I
0.323
HSF1
Otolemur garnettii
ENSOGAG00000028708
I
0.323
ENSP00000332698-D1
Bos grunniens
ENSP00000332698-D1
I
0.323
J056_002394
Wallemia ichthyophaga
J056_002394
I
0.322
ENSCSAG00000008638
Chlorocebus sabaeus
ENSCSAG00000008638
I
0.322
Hsf1
Dipodomys ordii
ENSDORG00000002333
I
0.322
HSF1
Cavia porcellus
ENSCPOG00000019305
I
0.322
AT-HSFB2A
Arabidopsis lyrata
scaffold_802851.1
I
0.322
HSFB2A
Arabidopsis thaliana
AT5G62020
D
0.322
D915_14985
Fasciola hepatica
D915_14985
I
0.322
ENSAMEG00000005847
Ailuropoda melanoleuca
ENSAMEG00000005847
I
0.322
HSF1
Canis familiaris
ENSCAFG00000001563
I
0.322
ENSTSYG00000006467
Tarsius syrichta
ENSTSYG00000006467
I
0.322
HSF1
Macaca mulatta
ENSMMUG00000014728
I
0.322
ENSPPYG00000018969
Pongo abelii
ENSPPYG00000018969
I
0.322
ENSPANG00000005938
Papio anubis
ENSPANG00000005938
I
0.322
ENSMPUG00000006704
Mustela putorius furo
ENSMPUG00000006704
I
0.322
Hsf1
Mus musculus
ENSMUSG00000022556
D
0.322
HSF1
Felis catus
ENSFCAG00000007722
I
0.322
Hsf1
Rattus norvegicus
ENSRNOG00000021732
I
0.322
HSF1
Homo sapiens
ENSG00000185122
D
0.322
ENSSTOG00000007173
Ictidomys tridecemlineatus
ENSSTOG00000007173
I
0.322
HSF1
Gorilla gorilla
ENSGGOG00000013602
I
0.322
HSF1
Loxodonta africana
ENSLAFG00000021374
I
0.322
O9G_004185
Rozella allomycis
O9G_004185
I
0.321
TPHA_0E02880
Tetrapisispora phaffii
TPHA_0E02880
I
0.318