Aan_R012662 (Calypte anna)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00605 (IRF) IPR001346 Aan_R012662 T244496_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IRF4
M03334_2.00
Homo sapiens
HCGAAACCGAAACYW

WRGTTTCGGTTTCGD
SELEX
Jolma et al.(2013)
IRF4_1
0.990 0.990
IRF4
M05539_2.00
Homo sapiens
NYGAAACYGAAACYN

NRGTTTCRGTTTCRN
SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX
0.990 0.990
IRF4
M07978_2.00
Homo sapiens
DNDVNNGWWVTGAVWVWN

NWBWBTCABWWCNNBHNH
ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha
0.990 0.990
IRF4
M09235_2.00
Homo sapiens
NDWDRRGGAASTGARAVH

DBTYTCASTTCCYYHWHN
Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A
0.990 0.990
IRF4
M09595_2.00
Homo sapiens
HNYGAAASYD

HRSTTTCRND
Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465
0.990 0.990
IRF4
M10885_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_07
0.990 0.990
IRF4
M10886_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_08
0.990 0.990
IRF4
M10887_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_Q5_01
0.990 0.990
IRF4
M10888_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_Q5
0.990 0.990
IRF4
M10889_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_Q6
0.990 0.990
IRF4
M05540_2.00
Homo sapiens
NYGAAASYGAWASHN

NDSTWTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX
0.990 0.990
Irf4
M00175_2.00
Mus musculus
NNNYGAWASN

NSTWTCRNNN
PBM
Badis et al.(2009)
Irf4_3476
0.981 0.981
Irf4
M09243_2.00
Mus musculus
NDAWVVRGAASTGARAVH

DBTYTCASTTCYBBWTHN
Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A
0.981 0.981
IRF8
M03335_2.00
Homo sapiens
HCGAAACYGAAACY

RGTTTCRGTTTCGD
SELEX
Jolma et al.(2013)
IRF8_1
0.800 0.800
IRF8
M03336_2.00
Homo sapiens
HCGAAACCGAAACT

AGTTTCGGTTTCGD
SELEX
Jolma et al.(2013)
IRF8_2
0.800 0.800
IRF8
M05541_2.00
Homo sapiens
NYGAAASYGAAASHN

NDSTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX
0.800 0.800
IRF8
M05543_2.00
Homo sapiens
NCGAAACYGAAACYN

NRGTTTCRGTTTCGN
SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX
0.800 0.800
IRF8
M09236_2.00
Homo sapiens
NDDDRRGGAASTGAAASYNN

NNRSTTTCASTTCCYYHHHN
Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B
0.800 0.800
Irf8
M09246_2.00
Mus musculus
NDDDRRGGAASTGAAASYNN

NNRSTTTCASTTCCYYHHHN
Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A
0.800 0.800
IRF8
M10890_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ICSBP_Q6
0.800 0.800
IRF8
M10891_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF8_Q6
0.800 0.800
IRF8
M05542_2.00
Homo sapiens
NYGAAASYGAAASYN

NRSTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX
0.800 0.800
IRF8
M05544_2.00
Homo sapiens
NYGAAASYGAAACYD

HRGTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX
0.800 0.800
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aan_R012662 IRF 19 124

Links

Other IRF family TFs
Other Calypte anna TFs

159 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSTRUG00000008763 Takifugu rubripes ENSTRUG00000008763 I 0.000
ENSTRUG00000012122 Takifugu rubripes ENSTRUG00000012122 I 0.000
ENSTRUG00000004613 Takifugu rubripes ENSTRUG00000004613 I 0.000
ENSTRUG00000015486 Takifugu rubripes ENSTRUG00000015486 I 0.000
ENSTRUG00000017318 Takifugu rubripes ENSTRUG00000017318 I 0.000
ENSTNIG00000019152 Tetraodon nigroviridis ENSTNIG00000019152 I 0.000
GLOTRDRAFT_35422 Gloeophyllum trabeum GLOTRDRAFT_35422 I 0.000
ENSTNIG00000008554 Tetraodon nigroviridis ENSTNIG00000008554 I 0.000
J056_001839 Wallemia ichthyophaga J056_001839 I 0.000
ENSTRUG00000010837 Takifugu rubripes ENSTRUG00000010837 I 0.000
GSPATT00015932001 Paramecium tetraurelia GSPATT00015932001 N 0.000
ENSTRUG00000009083 Takifugu rubripes ENSTRUG00000009083 N 0.000
ENSTNIG00000003241 Tetraodon nigroviridis ENSTNIG00000003241 N 0.000
ENSTNIG00000019520 Tetraodon nigroviridis ENSTNIG00000019520 N 0.000
ENSTNIG00000019507 Tetraodon nigroviridis ENSTNIG00000019507 N 0.000
ENSTNIG00000019151 Tetraodon nigroviridis ENSTNIG00000019151 N 0.000
ENSTNIG00000016643 Tetraodon nigroviridis ENSTNIG00000016643 N 0.000
ENSTNIG00000003747 Tetraodon nigroviridis ENSTNIG00000003747 N 0.000
WALSEDRAFT_18221 Wallemia sebi WALSEDRAFT_18221 N 0.000