BRADI3G55680 (Brachypodium distachyon)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 BRADI3G55680 T245114_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LBD16
M00870_2.00
Arabidopsis thaliana
DNHHYVCGG

CCGBRDDNH
PBM
Franco-Zorrilla et al.(2014)
LBD16
0.737 0.737
LBD16
M06958_2.00
Arabidopsis thaliana
SCGGAAAWNVCGSMR

YKSCGBNWTTTCCGS
Dap-seq
OMalley et al.(2016)
ASL18_col_a
0.737 0.737
LBD16
M06959_2.00
Arabidopsis thaliana
SCDBDWTTYVCGSHDN

NHDSCGBRAAWHVHGS
Dap-seq
OMalley et al.(2016)
ASL18_colamp_a
0.737 0.737
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G55680.1 LOB 16 115

Links

Other LOB family TFs
Other Brachypodium distachyon TFs

231 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL010319 Aedes aegypti AAEL010319 I 0.000
AATE001173 Anopheles atroparvus AATE001173 I 0.000
ACEP13468 Atta cephalotes ACEP13468 I 0.000
ACHR001316 Anopheles christyi ACHR001316 I 0.000
ACOM023042 Anopheles coluzzii ACOM023042 I 0.000
AFAF007194 Anopheles farauti AFAF007194 I 0.000
AFUN004137 Anopheles funestus AFUN004137 I 0.000
AGAP011082 Anopheles gambiae AGAP011082 I 0.000
AMEC006872 Anopheles melas AMEC006872 I 0.000
AMIN008510 Anopheles minimus AMIN008510 I 0.000
Cflo_10982--XP_395321.2_APIME Camponotus floridanus Cflo_10982--XP_395321.2_APIME I 0.000
DAPPUDRAFT_213340 Daphnia pulex DAPPUDRAFT_213340 I 0.000
ENSLOCG00000015059 Lepisosteus oculatus ENSLOCG00000015059 I 0.000
e_gw.6.354.1 Branchiostoma floridae e_gw.6.354.1 I 0.000
Hsf Drosophila melanogaster FBgn0001222 D 0.000
Hsf Drosophila yakuba FBgn0066133 I 0.000
GA19104 Drosophila pseudoobscura FBgn0079102 I 0.000
GF12282 Drosophila ananassae FBgn0089319 I 0.000
GG20992 Drosophila erecta FBgn0113176 I 0.000
GH20850 Drosophila grimshawi FBgn0128312 I 0.000
GI20955 Drosophila mojavensis FBgn0143689 I 0.000
GL10516 Drosophila persimilis FBgn0148126 I 0.000
GM19926 Drosophila sechellia FBgn0174812 I 0.000
GJ20676 Drosophila virilis FBgn0207814 I 0.000
GK19495 Drosophila willistoni FBgn0221493 I 0.000
GB52628 Apis mellifera GB52628 I 0.000
HMEL012502 Heliconius melpomene HMEL012502 I 0.000
ISCW007739 Ixodes scapularis ISCW007739 I 0.000
KGM_01871 Danaus plexippus KGM_01871 I 0.000
L798_00647 Zootermopsis nevadensis L798_00647 I 0.000
LCUP016473 Lucilia cuprina LCUP016473 I 0.000
LDEC001032 Leptinotarsa decemlineata LDEC001032 I 0.000
LLOJ009750 Lutzomyia longipalpis LLOJ009750 I 0.000
MCINX000434 Melitaea cinxia MCINX000434 I 0.000
MDOA007596 Musca domestica MDOA007596 I 0.000
NV16103 Nasonia vitripennis NV16103 I 0.000
TC001736 Tribolium castaneum TC001736 I 0.000
tetur02g00310 Tetranychus urticae tetur02g00310 I 0.000
YQE_02436 Dendroctonus ponderosae YQE_02436 I 0.000