BRADI3G55680 (Brachypodium distachyon)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 BRADI3G55680 T245114_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LBD16
M00870_2.00
Arabidopsis thaliana
DNHHYVCGG

CCGBRDDNH
PBM
Franco-Zorrilla et al.(2014)
LBD16
0.737 0.737
LBD16
M06958_2.00
Arabidopsis thaliana
SCGGAAAWNVCGSMR

YKSCGBNWTTTCCGS
Dap-seq
OMalley et al.(2016)
ASL18_col_a
0.737 0.737
LBD16
M06959_2.00
Arabidopsis thaliana
SCDBDWTTYVCGSHDN

NHDSCGBRAAWHVHGS
Dap-seq
OMalley et al.(2016)
ASL18_colamp_a
0.737 0.737
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G55680.1 LOB 16 115

Links

Other LOB family TFs
Other Brachypodium distachyon TFs

231 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28428.m000040 Ricinus communis 28428.m000040 I 0.727
29883.m002035 Ricinus communis 29883.m002035 I 0.768
30174.m008898 Ricinus communis 30174.m008898 I 0.707
AC149818.2_FG009 Zea mays AC149818.2_FG009 I 0.727
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I 0.717
Aquca_017_00683 Aquilegia coerulea Aquca_017_00683 I 0.717
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I 0.768
BGIOSGA005344 Oryza indica BGIOSGA005344 I 0.889
BGIOSGA011118 Oryza indica BGIOSGA011118 I 0.707
BGIOSGA011445 Oryza indica BGIOSGA011445 I 0.758
BGIOSGA011866 Oryza indica BGIOSGA011866 I 0.727
BGIOSGA026473 Oryza indica BGIOSGA026473 I 0.727
Bo3g036030 Brassica oleracea Bo3g036030 I 0.737
Bo4g016000 Brassica oleracea Bo4g016000 I 0.747
Bo4g191530 Brassica oleracea Bo4g191530 I 0.747
Bo8g092560 Brassica oleracea Bo8g092560 I 0.707
Bostr.20903s0070 Boechera stricta Bostr.20903s0070 I 0.717
Bostr.25993s0538 Boechera stricta Bostr.25993s0538 I 0.747
Bra000257 Brassica rapa Bra000257 I 0.737
Bra004693 Brassica rapa Bra004693 I 0.747
Bra016877 Brassica rapa Bra016877 I 0.737
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I 0.737
BRADI1G75120 Brachypodium distachyon BRADI1G75120 N 0.737
BRADI3G12550 Brachypodium distachyon BRADI3G12550 I 0.727
BRADI4G14890 Brachypodium distachyon BRADI4G14890 N 0.766
Cagra.0686s0035 Capsella grandiflora Cagra.0686s0035 I 0.707
Cagra.0686s0036 Capsella grandiflora Cagra.0686s0036 I 0.717
Cagra.2636s0029 Capsella grandiflora Cagra.2636s0029 I 0.747
Carubv10018619m.g Capsella rubella Carubv10018619m.g I 0.707
Carubv10019250m.g Capsella rubella Carubv10019250m.g I 0.717
Carubv10025548m.g Capsella rubella Carubv10025548m.g I 0.747
cassava15612.m1 Manihot esculenta cassava15612.m1 I 0.778
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I 0.707
cassava40664.m1 Manihot esculenta cassava40664.m1 I 0.737
cassava41632.m1 Manihot esculenta cassava41632.m1 I 0.717
Ca_07763 Cicer arietinum Ca_07763 I 0.707
Ca_12213 Cicer arietinum Ca_12213 I 0.768
Ca_12214 Cicer arietinum Ca_12214 I 0.707
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I 0.707
Ciclev10023341m.g Citrus clementina Ciclev10023341m.g I 0.717
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I 0.778
Cla006087 Citrullus lanatus Cla006087 I 0.727
Cla006088 Citrullus lanatus Cla006088 I 0.788
Cla007068 Citrullus lanatus Cla007068 I 0.707
Cla015094 Citrullus lanatus Cla015094 I 0.707
Cucsa.053440 Cucumis sativus Cucsa.053440 I 0.778
Cucsa.053450 Cucumis sativus Cucsa.053450 I 0.727
Cucsa.362840 Cucumis sativus Cucsa.362840 I 0.707
Eucgr.B01529 Eucalyptus grandis Eucgr.B01529 I 0.717
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.707
Eucgr.K03284 Eucalyptus grandis Eucgr.K03284 I 0.768
evm.TU.supercontig_50.42 Carica papaya evm.TU.supercontig_50.42 I 0.727
evm.TU.supercontig_50.43 Carica papaya evm.TU.supercontig_50.43 I 0.768
F775_21330 Aegilops tauschii F775_21330 N 0.742
F775_22967 Aegilops tauschii F775_22967 I 0.737
gene08250-v1.0-hybrid Fragaria vesca gene08250-v1.0-hybrid I 0.768
gene08253-v1.0-hybrid Fragaria vesca gene08253-v1.0-hybrid I 0.737
GLYMA03G31830 Glycine max GLYMA03G31830 I 0.788
GLYMA03G31860 Glycine max GLYMA03G31860 I 0.707
GLYMA10G04040 Glycine max GLYMA10G04040 I 0.737
GLYMA10G04050 Glycine max GLYMA10G04050 I 0.727
GLYMA13G18191 Glycine max GLYMA13G18191 I 0.717
GLYMA13G18210 Glycine max GLYMA13G18210 I 0.727
GLYMA19G34590 Glycine max GLYMA19G34590 I 0.778
GLYMA19G34600 Glycine max GLYMA19G34600 I 0.707
Gorai.001G251600 Gossypium raimondii Gorai.001G251600 I 0.768
Gorai.001G251700 Gossypium raimondii Gorai.001G251700 I 0.737
Gorai.004G073200 Gossypium raimondii Gorai.004G073200 I 0.717
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I 0.717
Gorai.004G073400 Gossypium raimondii Gorai.004G073400 I 0.778
Gorai.004G161100 Gossypium raimondii Gorai.004G161100 I 0.717
Gorai.004G220000 Gossypium raimondii Gorai.004G220000 I 0.737
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I 0.778
Gorai.007G144500 Gossypium raimondii Gorai.007G144500 I 0.717
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I 0.707
GRMZM2G075499 Zea mays GRMZM2G075499 I 0.909
GRMZM2G092483 Zea mays GRMZM2G092483 I 0.747
GRMZM2G092542 Zea mays GRMZM2G092542 I 0.758
GRMZM2G110913 Zea mays GRMZM2G110913 I 0.707
GSMUA_Achr10G06700_001 Musa acuminata GSMUA_Achr10G06700_001 I 0.727
GSMUA_Achr1G01350_001 Musa acuminata GSMUA_Achr1G01350_001 I 0.758
GSMUA_Achr1G01360_001 Musa acuminata GSMUA_Achr1G01360_001 I 0.747
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I 0.707
GSMUA_Achr2G11240_001 Musa acuminata GSMUA_Achr2G11240_001 I 0.717
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I 0.707
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I 0.717
GSMUA_Achr5G13230_001 Musa acuminata GSMUA_Achr5G13230_001 I 0.747
GSMUA_Achr8G14330_001 Musa acuminata GSMUA_Achr8G14330_001 I 0.717
GSMUA_AchrUn_randomG07730_001 Musa acuminata GSMUA_AchrUn_randomG07730_001 I 0.727
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I 0.717
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I 0.737
gw1.157.74.1 Physcomitrella patens gw1.157.74.1 I 0.707
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I 0.739
gw1.35.169.1 Physcomitrella patens gw1.35.169.1 I 0.707
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I 0.736
gw1.61.81.1 Physcomitrella patens gw1.61.81.1 I 0.707
LBD16 Arabidopsis thaliana AT2G42430 D 0.737
LBD16 Vitis vinifera VIT_07s0005g03030 I 0.798
LBD16 Arabidopsis lyrata scaffold_403099.1 I 0.737
LBD29 Arabidopsis thaliana AT3G58190 I 0.707
LBD29 Arabidopsis lyrata fgenesh2_kg.5__2263__AT3G58190.1 I 0.717
LPERR02G31040 Leersia perrieri LPERR02G31040 I 0.929
LPERR03G03460 Leersia perrieri LPERR03G03460 I 0.737
LPERR03G03470 Leersia perrieri LPERR03G03470 I 0.758
LPERR03G09330 Leersia perrieri LPERR03G09330 I 0.707
LPERR08G20530 Leersia perrieri LPERR08G20530 I 0.727
Lus10000613.g Linum usitatissimum Lus10000613.g I 0.727
Lus10000707.g Linum usitatissimum Lus10000707.g I 0.778
Lus10014757.g Linum usitatissimum Lus10014757.g I 0.768
Lus10024877.g Linum usitatissimum Lus10024877.g I 0.778
Lus10033872.g Linum usitatissimum Lus10033872.g I 0.768
Lus10033873.g Linum usitatissimum Lus10033873.g I 0.727
MDP0000131964 Malus domestica MDP0000131964 I 0.758
MDP0000145761 Malus domestica MDP0000145761 I 0.768
mgf020773m Mimulus guttatus mgf020773m I 0.727
mgf026090m Mimulus guttatus mgf026090m I 0.726
MLOC_10783 Hordeum vulgare MLOC_10783 N 0.758
MLOC_10784 Hordeum vulgare MLOC_10784 I 0.737
MLOC_52276 Hordeum vulgare MLOC_52276 I 0.727
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.707
MLOC_61947 Hordeum vulgare MLOC_61947 I 0.929
MTR_1g070205 Medicago truncatula MTR_1g070205 I 0.707
MTR_1g070220 Medicago truncatula MTR_1g070220 I 0.707
MTR_7g096530 Medicago truncatula MTR_7g096530 I 0.768
MTR_7g096610 Medicago truncatula MTR_7g096610 I 0.717
OB02G44330 Oryza brachyantha OB02G44330 I 0.899
OB03G13880 Oryza brachyantha OB03G13880 I 0.737
OB03G13890 Oryza brachyantha OB03G13890 I 0.758
OB08G30680 Oryza brachyantha OB08G30680 I 0.727
OBART02G37570 Oryza barthii OBART02G37570 I 0.747
OBART03G03830 Oryza barthii OBART03G03830 I 0.758
OBART03G10450 Oryza barthii OBART03G10450 I 0.707
OBART08G23860 Oryza barthii OBART08G23860 I 0.727
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I 0.889
OGLUM03G03710 Oryza glumaepatula OGLUM03G03710 I 0.719
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I 0.707
OGLUM08G25340 Oryza glumaepatula OGLUM08G25340 I 0.727
OLONG_001985 Oryza longistaminata OLONG_001985 I 0.722
OLONG_009479 Oryza longistaminata OLONG_009479 N 0.741
OLONG_010223 Oryza longistaminata OLONG_010223 I 0.727
OLONG_020841 Oryza longistaminata OLONG_020841 I 0.719
OMERI02G35350 Oryza meridionalis OMERI02G35350 I 0.889
OMERI03G09680 Oryza meridionalis OMERI03G09680 I 0.707
OMERI07G01660 Oryza meridionalis OMERI07G01660 I 0.758
OMERI08G18670 Oryza meridionalis OMERI08G18670 I 0.727
ONIVA02G40360 Oryza nivara ONIVA02G40360 I 0.889
ONIVA03G03580 Oryza nivara ONIVA03G03580 I 0.758
ONIVA09G01330 Oryza nivara ONIVA09G01330 I 0.727
OPUNC02G34750 Oryza punctata OPUNC02G34750 I 0.899
OPUNC03G03510 Oryza punctata OPUNC03G03510 I 0.727
OPUNC03G03520 Oryza punctata OPUNC03G03520 I 0.758
OPUNC03G10080 Oryza punctata OPUNC03G10080 I 0.707
OPUNC08G21770 Oryza punctata OPUNC08G21770 I 0.727
orange1.1g027399m.g Citrus sinensis orange1.1g027399m.g I 0.717
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I 0.707
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I 0.778
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I 0.889
ORGLA03G0035800 Oryza glaberrima ORGLA03G0035800 I 0.727
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I 0.758
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I 0.707
ORGLA08G0192400 Oryza glaberrima ORGLA08G0192400 I 0.727
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I 0.889
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I 0.758
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I 0.707
ORUFI08G26340 Oryza rufipogon ORUFI08G26340 I 0.727
OS02G0820500 Oryza sativa OS02G0820500 I 0.889
OS03G0149000 Oryza sativa OS03G0149000 I 0.727
OS03G0149100 Oryza sativa OS03G0149100 I 0.758
OS03G0246900 Oryza sativa OS03G0246900 I 0.707
OS08G0563400 Oryza sativa OS08G0563400 I 0.727
Pavir.Aa00097 Panicum virgatum Pavir.Aa00097 I 0.899
Pavir.Fa00011 Panicum virgatum Pavir.Fa00011 I 0.707
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I 0.758
Pavir.Ib00282 Panicum virgatum Pavir.Ib00282 I 0.747
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I 0.758
Pavir.J03376 Panicum virgatum Pavir.J03376 I 0.758
Pavir.J24246 Panicum virgatum Pavir.J24246 I 0.737
Pavir.J34872 Panicum virgatum Pavir.J34872 I 0.707
Pavir.J39638 Panicum virgatum Pavir.J39638 I 0.899
PDK_20s1428661g002 Phoenix dactylifera PDK_20s1428661g002 I 0.768
PGSC0003DMG400009713 Solanum tuberosum PGSC0003DMG400009713 I 0.758
PGSC0003DMG400020069 Solanum tuberosum PGSC0003DMG400020069 I 0.707
PGSC0003DMG402012772 Solanum tuberosum PGSC0003DMG402012772 I 0.713
PK23380.1 Cannabis sativa PK23380.1 I 0.716
Pm017936 Prunus mume Pm017936 I 0.707
Pm020629 Prunus mume Pm020629 I 0.768
POPTR_0002s04200 Populus trichocarpa POPTR_0002s04200 I 0.717
POPTR_0002s04210 Populus trichocarpa POPTR_0002s04210 I 0.758
POPTR_0005s24320 Populus trichocarpa POPTR_0005s24320 I 0.788
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I 0.707
PRUPE_ppa025349mg Prunus persica PRUPE_ppa025349mg I 0.758
PRUPE_ppa025889mg Prunus persica PRUPE_ppa025889mg I 0.707
SapurV1A.0006s0970 Salix purpurea SapurV1A.0006s0970 I 0.707
SapurV1A.0006s0980 Salix purpurea SapurV1A.0006s0980 I 0.758
SapurV1A.0378s0180 Salix purpurea SapurV1A.0378s0180 I 0.788
Sb01g041130 Sorghum bicolor Sb01g041130 I 0.707
Sb01g046990 Sorghum bicolor Sb01g046990 I 0.758
Sb01g047000 Sorghum bicolor Sb01g047000 I 0.758
Sb04g037550 Sorghum bicolor Sb04g037550 I 0.909
Sb07g023810 Sorghum bicolor Sb07g023810 I 0.727
SELMODRAFT_49270 Selaginella moellendorffii SELMODRAFT_49270 I 0.701
SELMODRAFT_59642 Selaginella moellendorffii SELMODRAFT_59642 I 0.701
Si015156m.g Setaria italica Si015156m.g I 0.717
Si019578m.g Setaria italica Si019578m.g I 0.919
Si037727m.g Setaria italica Si037727m.g I 0.747
Si040019m.g Setaria italica Si040019m.g I 0.758
Solyc01g091420.1 Solanum lycopersicum Solyc01g091420.1 I 0.717
Solyc06g083930.1 Solanum lycopersicum Solyc06g083930.1 I 0.727
Solyc09g066260.2 Solanum lycopersicum Solyc09g066260.2 I 0.717
TCM_004106 Theobroma cacao TCM_004106 I 0.778
TCM_005496 Theobroma cacao TCM_005496 I 0.707
Thhalv10006226m.g Eutrema salsugineum Thhalv10006226m.g I 0.707
Thhalv10006423m.g Eutrema salsugineum Thhalv10006423m.g I 0.717
Thhalv10017158m.g Eutrema salsugineum Thhalv10017158m.g I 0.747
Traes_4AL_3BA1D51E2 Triticum aestivum Traes_4AL_3BA1D51E2 N 0.758
Traes_4AL_BB3F89030 Triticum aestivum Traes_4AL_BB3F89030 N 0.707
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I 0.747
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.707
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I 0.737
Traes_4BL_F71DE14F7 Triticum aestivum Traes_4BL_F71DE14F7 N 0.737
Traes_4BS_5D9291539 Triticum aestivum Traes_4BS_5D9291539 I 0.737
Traes_4BS_B43A99154 Triticum aestivum Traes_4BS_B43A99154 N 0.737
Traes_4DL_05F87867C Triticum aestivum Traes_4DL_05F87867C N 0.747
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I 0.737
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.707
Traes_4DS_11C3B0459 Triticum aestivum Traes_4DS_11C3B0459 I 0.737
Traes_6AL_D6045E37C Triticum aestivum Traes_6AL_D6045E37C I 0.929
Traes_6DL_850266B2A Triticum aestivum Traes_6DL_850266B2A I 0.939
TRIUR3_01477 Triticum urartu TRIUR3_01477 I 0.929
TRIUR3_07751 Triticum urartu TRIUR3_07751 I 0.737
VIT_07s0005g03020 Vitis vinifera VIT_07s0005g03020 I 0.717