GSMUA_Achr5G15570_001 (Musa acuminata)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 GSMUA_Achr5G15570_001 T245347_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P15570_001 LOB 10 51

Links

Other LOB family TFs
Other Musa acuminata TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400013182 Solanum tuberosum PGSC0003DMG400013182 N 0.810
Cla010520 Citrullus lanatus Cla010520 N 0.786
Bra018102 Brassica rapa Bra018102 N 0.786
Bo3g135950 Brassica oleracea Bo3g135950 N 0.786
MDP0000216231 Malus domestica MDP0000216231 N 0.762
evm.TU.supercontig_17.185 Carica papaya evm.TU.supercontig_17.185 N 0.762
Ciclev10029958m.g Citrus clementina Ciclev10029958m.g N 0.762
Aquca_002_00445 Aquilegia coerulea Aquca_002_00445 N 0.762
orange1.1g042591m.g Citrus sinensis orange1.1g042591m.g N 0.762
LjSGA_089351.1 Lotus japonicus LjSGA_089351.1 N 0.738
mgf001804m Mimulus guttatus mgf001804m N 0.738
LPERR09G05130 Leersia perrieri LPERR09G05130 N 0.738
Bo1g072490 Brassica oleracea Bo1g072490 N 0.738
estExt_gwp_gw1.C_1340024 Physcomitrella patens estExt_gwp_gw1.C_1340024 N 0.738
gene01286-v1.0-hybrid Fragaria vesca gene01286-v1.0-hybrid N 0.738
PRUPE_ppa025223mg Prunus persica PRUPE_ppa025223mg N 0.738
Pm024623 Prunus mume Pm024623 N 0.738
Ciclev10021399m.g Citrus clementina Ciclev10021399m.g N 0.738
Pavir.J09527 Panicum virgatum Pavir.J09527 N 0.714
Gorai.007G034800 Gossypium raimondii Gorai.007G034800 N 0.714
Pavir.Ba02946 Panicum virgatum Pavir.Ba02946 N 0.714
chr2.CM0225.220.nd Lotus japonicus chr2.CM0225.220.nd N 0.714
gw1.13.203.1 Physcomitrella patens gw1.13.203.1 N 0.714
MLOC_81908 Hordeum vulgare MLOC_81908 N 0.714
BRADI3G35280 Brachypodium distachyon BRADI3G35280 N 0.714
MTR_5g085390 Medicago truncatula MTR_5g085390 N 0.714
Si008052m.g Setaria italica Si008052m.g N 0.714
Si015783m.g Setaria italica Si015783m.g N 0.714
gw1.56.82.1 Physcomitrella patens gw1.56.82.1 N 0.714