MDP0000216231 (Malus domestica)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 MDP0000216231 T247091_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000216231 LOB 74 172

Links

Other LOB family TFs
Other Malus domestica TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000153290 Malus domestica MDP0000153290 N 0.919
Pm024623 Prunus mume Pm024623 N 0.869
PRUPE_ppa025223mg Prunus persica PRUPE_ppa025223mg N 0.869
gene09561-v1.0-hybrid Fragaria vesca gene09561-v1.0-hybrid N 0.798
cassava19740.m1 Manihot esculenta cassava19740.m1 N 0.798
Ciclev10021399m.g Citrus clementina Ciclev10021399m.g N 0.788
TCM_030184 Theobroma cacao TCM_030184 N 0.778
evm.TU.supercontig_17.185 Carica papaya evm.TU.supercontig_17.185 N 0.778
GSMUA_Achr5G15570_001 Musa acuminata GSMUA_Achr5G15570_001 N 0.762
cassava35156.m1 Manihot esculenta cassava35156.m1 N 0.758
SapurV1A.0161s0030 Salix purpurea SapurV1A.0161s0030 N 0.747
Ca_15323 Cicer arietinum Ca_15323 N 0.747
Gorai.007G034800 Gossypium raimondii Gorai.007G034800 N 0.747
Solyc03g113360.2 Solanum lycopersicum Solyc03g113360.2 N 0.745
30147.m014053 Ricinus communis 30147.m014053 N 0.737
MTR_4g107450 Medicago truncatula MTR_4g107450 N 0.737
PGSC0003DMG400013182 Solanum tuberosum PGSC0003DMG400013182 N 0.727
Gorai.003G070700 Gossypium raimondii Gorai.003G070700 N 0.727
POPTR_0015s07780 Populus trichocarpa POPTR_0015s07780 N 0.727
SapurV1A.0138s0160 Salix purpurea SapurV1A.0138s0160 N 0.717
Aquca_002_00445 Aquilegia coerulea Aquca_002_00445 N 0.717
POPTR_0012s07390 Populus trichocarpa POPTR_0012s07390 N 0.717
SCP Vitis vinifera VIT_17s0000g05490 N 0.707