cassava19740.m1 (Manihot esculenta)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 cassava19740.m1 T246445_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava19740.m1 LOB 10 108

Links

Other LOB family TFs
Other Manihot esculenta TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30147.m014053 Ricinus communis 30147.m014053 N 0.848
Ciclev10021399m.g Citrus clementina Ciclev10021399m.g N 0.848
SapurV1A.0161s0030 Salix purpurea SapurV1A.0161s0030 N 0.828
cassava35156.m1 Manihot esculenta cassava35156.m1 N 0.828
SapurV1A.0138s0160 Salix purpurea SapurV1A.0138s0160 N 0.818
POPTR_0012s07390 Populus trichocarpa POPTR_0012s07390 N 0.818
evm.TU.supercontig_17.185 Carica papaya evm.TU.supercontig_17.185 N 0.808
POPTR_0015s07780 Populus trichocarpa POPTR_0015s07780 N 0.798
MDP0000216231 Malus domestica MDP0000216231 N 0.798
SCP Vitis vinifera VIT_17s0000g05490 N 0.778
MDP0000153290 Malus domestica MDP0000153290 N 0.768
Pm024623 Prunus mume Pm024623 N 0.747
TCM_030184 Theobroma cacao TCM_030184 N 0.747
PRUPE_ppa025223mg Prunus persica PRUPE_ppa025223mg N 0.747
orange1.1g042591m.g Citrus sinensis orange1.1g042591m.g N 0.717
Ciclev10029958m.g Citrus clementina Ciclev10029958m.g N 0.717
Gorai.007G034800 Gossypium raimondii Gorai.007G034800 N 0.717
gene09561-v1.0-hybrid Fragaria vesca gene09561-v1.0-hybrid N 0.707
Gorai.003G070700 Gossypium raimondii Gorai.003G070700 N 0.707