POPTR_0012s07390 (Populus trichocarpa)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 POPTR_0012s07390 T245893_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0012s07390.1 LOB 10 108
POPTR_0012s07390.2 LOB 10 108

Links

Other LOB family TFs
Other Populus trichocarpa TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0138s0160 Salix purpurea SapurV1A.0138s0160 N 0.929
SapurV1A.0161s0030 Salix purpurea SapurV1A.0161s0030 N 0.859
POPTR_0015s07780 Populus trichocarpa POPTR_0015s07780 N 0.848
cassava19740.m1 Manihot esculenta cassava19740.m1 N 0.818
30147.m014053 Ricinus communis 30147.m014053 N 0.798
cassava35156.m1 Manihot esculenta cassava35156.m1 N 0.788
Ciclev10021399m.g Citrus clementina Ciclev10021399m.g N 0.758
evm.TU.supercontig_17.185 Carica papaya evm.TU.supercontig_17.185 N 0.758
MDP0000216231 Malus domestica MDP0000216231 N 0.717
TCM_030184 Theobroma cacao TCM_030184 N 0.707
MDP0000153290 Malus domestica MDP0000153290 N 0.707