CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Si005134m.g
(
Setaria italica
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
Si005134m.g
T246040_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si005134m
LOB
14
114
ACAVCKHQRRKCEPNCELAAYFPAHRMNDFRALHLVFGVANLTKLIIKANATDAARRRAAETLTWEARWRERDPAEGCYREVACLRRDNALLRADNAALRR
Links
Other
LOB
family TFs
Other
Setaria italica
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J05697
Panicum virgatum
Pavir.J05697
N
0.919
LPERR01G08470
Leersia perrieri
LPERR01G08470
N
0.919
OPUNC01G08860
Oryza punctata
OPUNC01G08860
N
0.909
ORUFI01G09790
Oryza rufipogon
ORUFI01G09790
N
0.909
OS01G0242400
Oryza sativa
OS01G0242400
N
0.909
BGIOSGA003124
Oryza indica
BGIOSGA003124
N
0.909
Pavir.J38430
Panicum virgatum
Pavir.J38430
N
0.909
ONIVA01G11590
Oryza nivara
ONIVA01G11590
N
0.909
OMERI01G09040
Oryza meridionalis
OMERI01G09040
N
0.909
OGLUM01G10300
Oryza glumaepatula
OGLUM01G10300
N
0.909
TRAES3BF081300020CFD_g
Triticum aestivum
TRAES3BF081300020CFD_g
N
0.899
Sb10g029595
Sorghum bicolor
Sb10g029595
N
0.899
OBART01G08980
Oryza barthii
OBART01G08980
N
0.899
ORGLA01G0080800
Oryza glaberrima
ORGLA01G0080800
N
0.899
BRADI2G08480
Brachypodium distachyon
BRADI2G08480
N
0.889
GRMZM2G180319
Zea mays
GRMZM2G180319
N
0.889