Pavir.J05697 (Panicum virgatum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Pavir.J05697 T247227_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J05697.1.p LOB 44 143

Links

Other LOB family TFs
Other Panicum virgatum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC01G08860 Oryza punctata OPUNC01G08860 N 0.990
Pavir.J38430 Panicum virgatum Pavir.J38430 N 0.990
ORUFI01G09790 Oryza rufipogon ORUFI01G09790 N 0.980
TRAES3BF081300020CFD_g Triticum aestivum TRAES3BF081300020CFD_g N 0.980
BGIOSGA003124 Oryza indica BGIOSGA003124 N 0.980
OS01G0242400 Oryza sativa OS01G0242400 N 0.980
ONIVA01G11590 Oryza nivara ONIVA01G11590 N 0.980
OMERI01G09040 Oryza meridionalis OMERI01G09040 N 0.980
LPERR01G08470 Leersia perrieri LPERR01G08470 N 0.980
OGLUM01G10300 Oryza glumaepatula OGLUM01G10300 N 0.980
ORGLA01G0080800 Oryza glaberrima ORGLA01G0080800 N 0.970
OBART01G08980 Oryza barthii OBART01G08980 N 0.970
BRADI2G08480 Brachypodium distachyon BRADI2G08480 N 0.970
Sb10g029595 Sorghum bicolor Sb10g029595 N 0.960
GRMZM2G180319 Zea mays GRMZM2G180319 N 0.949
Si005134m.g Setaria italica Si005134m.g N 0.919