Traes_1DL_B8551270A (Triticum aestivum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Traes_1DL_B8551270A T246157_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD6
M06955_2.00 		Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN
NHDYCKCCGYHDHHNCCGSCG		 Dap-seq
OMalley et al.(2016)
AS2_col_a 		0.778 0.778
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_1DL_B8551270A.1 LOB 1 27

Links

Other LOB family TFs
Other Triticum aestivum TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_21760 Aegilops tauschii F775_21760 I 1.000
OB05G24560 Oryza brachyantha OB05G24560 I 1.000
MLOC_61156 Hordeum vulgare MLOC_61156 I 0.963
TRIUR3_23928 Triticum urartu TRIUR3_23928 I 0.963
Traes_1AL_4B89B33E3 Triticum aestivum Traes_1AL_4B89B33E3 I 0.963
OGLUM05G17630 Oryza glumaepatula OGLUM05G17630 I 0.926
OS05G0417000 Oryza sativa OS05G0417000 I 0.926
ORGLA05G0143500 Oryza glaberrima ORGLA05G0143500 I 0.926
BGIOSGA018046 Oryza indica BGIOSGA018046 I 0.926
BRADI2G25270 Brachypodium distachyon BRADI2G25270 I 0.926
ORUFI05G17830 Oryza rufipogon ORUFI05G17830 I 0.926
Pavir.J22284 Panicum virgatum Pavir.J22284 I 0.852
Pavir.J16692 Panicum virgatum Pavir.J16692 I 0.852
Si002599m.g Setaria italica Si002599m.g I 0.852
Pavir.Ea03589 Panicum virgatum Pavir.Ea03589 I 0.852
Sb03g042310 Sorghum bicolor Sb03g042310 I 0.852
GRMZM2G118250 Zea mays GRMZM2G118250 I 0.852
GRMZM2G133806 Zea mays GRMZM2G133806 I 0.852
mgf014755m Mimulus guttatus mgf014755m I 0.815
MDP0000273432 Malus domestica MDP0000273432 I 0.815
Eucgr.C02148 Eucalyptus grandis Eucgr.C02148 I 0.815
PRUPE_ppa027059mg Prunus persica PRUPE_ppa027059mg I 0.815
AS2 Vitis vinifera VIT_00s0340g00090 I 0.815
Pm003744 Prunus mume Pm003744 I 0.815
MDP0000643326 Malus domestica MDP0000643326 I 0.815
gene21541-v1.0-hybrid Fragaria vesca gene21541-v1.0-hybrid I 0.815
29929.m004500 Ricinus communis 29929.m004500 I 0.778
SapurV1A.0093s0490 Salix purpurea SapurV1A.0093s0490 I 0.778
cassava1141.valid.m1 Manihot esculenta cassava1141.valid.m1 I 0.778
SapurV1A.0164s0090 Salix purpurea SapurV1A.0164s0090 I 0.778
Ca_20200 Cicer arietinum Ca_20200 I 0.778
Bra039733 Brassica rapa Bra039733 I 0.778
TRIUR3_32863 Triticum urartu TRIUR3_32863 I 0.778
Thhalv10019572m.g Eutrema salsugineum Thhalv10019572m.g I 0.778
LBD6 Arabidopsis thaliana AT1G65620 D 0.778
Bostr.26959s0351 Boechera stricta Bostr.26959s0351 I 0.778
Gorai.007G350300 Gossypium raimondii Gorai.007G350300 I 0.778
Lus10013610.g Linum usitatissimum Lus10013610.g I 0.778
Pavir.J03238 Panicum virgatum Pavir.J03238 I 0.778
TCM_024217 Theobroma cacao TCM_024217 I 0.778
evm.TU.supercontig_39.110 Carica papaya evm.TU.supercontig_39.110 I 0.778
Cagra.10809s0001 Capsella grandiflora Cagra.10809s0001 I 0.778
Carubv10020974m.g Capsella rubella Carubv10020974m.g I 0.778
Pavir.J03307 Panicum virgatum Pavir.J03307 I 0.778
Bo2g051420 Brassica oleracea Bo2g051420 I 0.778
TRAES3BF084400010CFD_g Triticum aestivum TRAES3BF084400010CFD_g I 0.778
AMTR_s00066p00120340 Amborella trichopoda AMTR_s00066p00120340 I 0.778
GLYMA15G36310 Glycine max GLYMA15G36310 I 0.778
POPTR_0010s18460 Populus trichocarpa POPTR_0010s18460 I 0.778
AS2 Arabidopsis lyrata fgenesh2_kg.2__796__AT1G65620.2 I 0.778
POPTR_0008s07930 Populus trichocarpa POPTR_0008s07930 I 0.778
GLYMA13G26020 Glycine max GLYMA13G26020 I 0.778
F775_20715 Aegilops tauschii F775_20715 I 0.778
Solyc11g008830.1 Solanum lycopersicum Solyc11g008830.1 I 0.778
MLOC_72525 Hordeum vulgare MLOC_72525 I 0.778
Solyc03g063140.2 Solanum lycopersicum Solyc03g063140.2 I 0.778
Si024114m.g Setaria italica Si024114m.g I 0.778
MTR_8g040900 Medicago truncatula MTR_8g040900 I 0.778
PGSC0003DMG400000974 Solanum tuberosum PGSC0003DMG400000974 I 0.778
OB01G48740 Oryza brachyantha OB01G48740 I 0.741
BRADI2G57380 Brachypodium distachyon BRADI2G57380 I 0.741
orange1.1g027472m.g Citrus sinensis orange1.1g027472m.g I 0.741
Ciclev10017910m.g Citrus clementina Ciclev10017910m.g I 0.741
Cla005851 Citrullus lanatus Cla005851 I 0.741
Sb09g020440 Sorghum bicolor Sb09g020440 I 0.741
Cucsa.178830 Cucumis sativus Cucsa.178830 I 0.741
OBART01G39990 Oryza barthii OBART01G39990 I 0.704
LBD6 Oryza indica BGIOSGA004955 I 0.704
ORUFI01G43320 Oryza rufipogon ORUFI01G43320 I 0.704
Ca_02124 Cicer arietinum Ca_02124 I 0.704
LPERR01G34430 Leersia perrieri LPERR01G34430 I 0.704
OGLUM01G44190 Oryza glumaepatula OGLUM01G44190 I 0.704
LBD6 Oryza sativa OS01G0889400 I 0.704
ONIVA01G44840 Oryza nivara ONIVA01G44840 I 0.704
OPUNC01G38680 Oryza punctata OPUNC01G38680 I 0.704
OMERI01G36900 Oryza meridionalis OMERI01G36900 I 0.704
ASL1 Arabidopsis lyrata fgenesh2_kg.8__2729__AT5G66870.1 I 0.704
OLONG_016086 Oryza longistaminata OLONG_016086 I 0.704
ORGLA01G0339000 Oryza glaberrima ORGLA01G0339000 I 0.704