Cla015827 (Citrullus lanatus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Cla015827 T246349_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla015827 LOB 31 129

Links

Other LOB family TFs
Other Citrullus lanatus TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.360530 Cucumis sativus Cucsa.360530 N 0.990
cassava2716.m1 Manihot esculenta cassava2716.m1 N 0.889
cassava34925.m1 Manihot esculenta cassava34925.m1 N 0.879
cassava34926.m1 Manihot esculenta cassava34926.m1 N 0.879
SapurV1A.0697s0010 Salix purpurea SapurV1A.0697s0010 N 0.879
POPTR_0003s04520 Populus trichocarpa POPTR_0003s04520 N 0.869
Pm013344 Prunus mume Pm013344 N 0.869
POPTR_0001s20110 Populus trichocarpa POPTR_0001s20110 N 0.869
28694.m000665 Ricinus communis 28694.m000665 N 0.869
MDP0000257227 Malus domestica MDP0000257227 N 0.859
TCM_029052 Theobroma cacao TCM_029052 N 0.859
Gorai.011G064500 Gossypium raimondii Gorai.011G064500 N 0.859
PGSC0003DMG400004880 Solanum tuberosum PGSC0003DMG400004880 N 0.859
gene23043-v1.0-hybrid Fragaria vesca gene23043-v1.0-hybrid N 0.848
Solyc06g062630.2 Solanum lycopersicum Solyc06g062630.2 N 0.843
evm.TU.supercontig_25.41 Carica papaya evm.TU.supercontig_25.41 N 0.838
mgf019664m Mimulus guttatus mgf019664m N 0.818
GLYMA07G01170 Glycine max GLYMA07G01170 N 0.818
GLYMA08G20550 Glycine max GLYMA08G20550 N 0.818
Ca_10077 Cicer arietinum Ca_10077 N 0.808
MTR_8g017090 Medicago truncatula MTR_8g017090 N 0.808
chr3.CM0049.30.nd Lotus japonicus chr3.CM0049.30.nd N 0.808
TCM_029050 Theobroma cacao TCM_029050 N 0.798
Carubv10014142m.g Capsella rubella Carubv10014142m.g N 0.798
LBD22 Arabidopsis lyrata fgenesh2_kg.3__1489__AT3G13850.1 N 0.798
Bostr.28625s0323 Boechera stricta Bostr.28625s0323 N 0.788
Cagra.0736s0021 Capsella grandiflora Cagra.0736s0021 N 0.788
LBD22 Arabidopsis thaliana AT3G13850 N 0.788
Lus10003789.g Linum usitatissimum Lus10003789.g N 0.778
Bo5g132010 Brassica oleracea Bo5g132010 N 0.778
Thhalv10021306m.g Eutrema salsugineum Thhalv10021306m.g N 0.768
Bo1g134830 Brassica oleracea Bo1g134830 N 0.768
Bra021513 Brassica rapa Bra021513 N 0.768
Lus10002513.g Linum usitatissimum Lus10002513.g N 0.758
GSMUA_Achr3G25850_001 Musa acuminata GSMUA_Achr3G25850_001 N 0.707