CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM5G850092
(
Zea mays
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
GRMZM5G850092
T249152_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM5G850092_P01
MADF
28
108
LIDAYEERWTALRRGQLKAHQWEEVATEVAARCAANPGVIAQRKTGTQCRHKLEKLRKRYRTEGARPVTSLWPYFRRMDRL
Links
Other
MADF
family TFs
Other
Zea mays
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G379179
Zea mays
GRMZM2G379179
N
0.965
Sb07g029070
Sorghum bicolor
Sb07g029070
N
0.953
Si014062m.g
Setaria italica
Si014062m.g
N
0.917
Pavir.J15698
Panicum virgatum
Pavir.J15698
N
0.905
MLOC_51079
Hordeum vulgare
MLOC_51079
N
0.883
Traes_5BL_81FD6E89B
Triticum aestivum
Traes_5BL_81FD6E89B
N
0.878
Aquca_010_00154
Aquilegia coerulea
Aquca_010_00154
N
0.861
LPERR08G15410
Leersia perrieri
LPERR08G15410
N
0.855
29709.m001180
Ricinus communis
29709.m001180
N
0.851
POPTR_0014s05010
Populus trichocarpa
POPTR_0014s05010
N
0.851
POPTR_0002s14030
Populus trichocarpa
POPTR_0002s14030
N
0.851
PK17306.1
Cannabis sativa
PK17306.1
N
0.847
Ciclev10020863m.g
Citrus clementina
Ciclev10020863m.g
N
0.846
orange1.1g018620m.g
Citrus sinensis
orange1.1g018620m.g
N
0.846
SapurV1A.0033s0070
Salix purpurea
SapurV1A.0033s0070
N
0.846
GSMUA_Achr6G04170_001
Musa acuminata
GSMUA_Achr6G04170_001
N
0.843
TCM_005773
Theobroma cacao
TCM_005773
N
0.841
Gorai.004G167100
Gossypium raimondii
Gorai.004G167100
N
0.836
Carubv10025047m.g
Capsella rubella
Carubv10025047m.g
N
0.832
Cagra.0239s0022
Capsella grandiflora
Cagra.0239s0022
N
0.832
Bostr.25993s0300
Boechera stricta
Bostr.25993s0300
N
0.824
AT2G44730
Arabidopsis thaliana
AT2G44730
N
0.824
VIT_07s0005g06670
Vitis vinifera
VIT_07s0005g06670
N
0.822
Thhalv10001488m.g
Eutrema salsugineum
Thhalv10001488m.g
N
0.818
Bra000360
Brassica rapa
Bra000360
N
0.818
Bo3g037360
Brassica oleracea
Bo3g037360
N
0.818
BRADI3G38680
Brachypodium distachyon
BRADI3G38680
N
0.815
evm.TU.supercontig_41.83
Carica papaya
evm.TU.supercontig_41.83
N
0.814