29709.m001180 (Ricinus communis)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 29709.m001180 T250440_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29709.m001180 MADF 187 270

Links

Other MADF family TFs
Other Ricinus communis TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0002s14030 Populus trichocarpa POPTR_0002s14030 N 0.970
SapurV1A.0033s0070 Salix purpurea SapurV1A.0033s0070 N 0.954
POPTR_0014s05010 Populus trichocarpa POPTR_0014s05010 N 0.953
cassava12982.valid.m1 Manihot esculenta cassava12982.valid.m1 N 0.942
Bra000360 Brassica rapa Bra000360 N 0.941
Bo3g037360 Brassica oleracea Bo3g037360 N 0.941
orange1.1g018620m.g Citrus sinensis orange1.1g018620m.g N 0.939
Carubv10025047m.g Capsella rubella Carubv10025047m.g N 0.939
VIT_15s0021g01220 Vitis vinifera VIT_15s0021g01220 N 0.939
Ciclev10020863m.g Citrus clementina Ciclev10020863m.g N 0.939
Cagra.0239s0022 Capsella grandiflora Cagra.0239s0022 N 0.939
TCM_005773 Theobroma cacao TCM_005773 N 0.938
PK17306.1 Cannabis sativa PK17306.1 N 0.937
Gorai.004G167100 Gossypium raimondii Gorai.004G167100 N 0.936
fgenesh2_kg.4__2662__AT2G44730.1 Arabidopsis lyrata fgenesh2_kg.4__2662__AT2G44730.1 N 0.935
Bostr.25993s0300 Boechera stricta Bostr.25993s0300 N 0.935
AT2G44730 Arabidopsis thaliana AT2G44730 N 0.935
Cucsa.256710 Cucumis sativus Cucsa.256710 N 0.933
Cla021714 Citrullus lanatus Cla021714 N 0.933
mgf005560m Mimulus guttatus mgf005560m N 0.926
evm.TU.supercontig_41.83 Carica papaya evm.TU.supercontig_41.83 N 0.925
Bo4g023990 Brassica oleracea Bo4g023990 N 0.921
gene05318-v1.0-hybrid Fragaria vesca gene05318-v1.0-hybrid N 0.919
GLYMA18G48343 Glycine max GLYMA18G48343 N 0.913
Ca_06067 Cicer arietinum Ca_06067 N 0.911
MDP0000557282 Malus domestica MDP0000557282 N 0.907
MTR_4g117990 Medicago truncatula MTR_4g117990 N 0.907
Thhalv10001488m.g Eutrema salsugineum Thhalv10001488m.g N 0.895
Ca_06795 Cicer arietinum Ca_06795 N 0.895
GLYMA08G05630 Glycine max GLYMA08G05630 N 0.895
Bra004859 Brassica rapa Bra004859 N 0.890
chr4.CM0739.40.nd Lotus japonicus chr4.CM0739.40.nd N 0.888
GLYMA09G38050 Glycine max GLYMA09G38050 N 0.874
MTR_7g081190 Medicago truncatula MTR_7g081190 N 0.872
Aquca_010_00154 Aquilegia coerulea Aquca_010_00154 N 0.864
GRMZM5G850092 Zea mays GRMZM5G850092 N 0.851
GRMZM2G379179 Zea mays GRMZM2G379179 N 0.851
Solyc01g088820.2 Solanum lycopersicum Solyc01g088820.2 N 0.848
Cucsa.078220 Cucumis sativus Cucsa.078220 N 0.847
PGSC0003DMG400001696 Solanum tuberosum PGSC0003DMG400001696 N 0.832
MDP0000158598 Malus domestica MDP0000158598 N 0.829
GSMUA_Achr11G17710_001 Musa acuminata GSMUA_Achr11G17710_001 N 0.829
MDP0000271048 Malus domestica MDP0000271048 N 0.815
Gorai.001G233700 Gossypium raimondii Gorai.001G233700 N 0.814