28077.m000081 (Ricinus communis)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 28077.m000081 T250435_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G10030
M01258_2.00
Arabidopsis thaliana
NRMCGTTAWNN

NNWTAACGKYN
PBM
Lambert et al.(2019)
pTH11538
0.895 0.639
AT3G10030
M06971_2.00
Arabidopsis thaliana
HRHCKCCGTTANND

HNNTAACGGMGDYD
Dap-seq
OMalley et al.(2016)
AT3G10030_col_a
0.895 0.639
AT3G10030
M06972_2.00
Arabidopsis thaliana
HWRHMKCCGTTAAHD

HDTTAACGGMKDYWD
Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a
0.895 0.639
PK04914.1
M01262_2.00
Cannabis sativa
DCCGTYAN

NTRACGGH
PBM
Lambert et al.(2019)
pTH10098
0.859 0.597
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
28077.m000081 MADF 111 195

Links

Other MADF family TFs
Other Ricinus communis TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A_04259 Schistosoma haematobium A_04259 N 0.000
csin107639 Clonorchis sinensis csin107639 N 0.000
DILT_0000112601 Diphyllobothrium latum DILT_0000112601 N 0.000
ECANG7_01394 Echinococcus canadensis ECANG7_01394 N 0.000
ECPE_0001508301 Echinostoma caproni ECPE_0001508301 N 0.000
EmuJ_000829600 Echinococcus multilocularis EmuJ_000829600 N 0.000
HmN_000514500 Hymenolepis microstoma HmN_000514500 N 0.000
HNAJ_0000040201 Hymenolepis nana HNAJ_0000040201 N 0.000
SCUD_0001647201 Schistosoma curassoni SCUD_0001647201 N 0.000
Smp_128120 Schistosoma mansoni Smp_128120 N 0.000
SMTD_0001069201 Schistosoma mattheei SMTD_0001069201 N 0.000
SMU15005401 Schmidtea mediterranea SMU15005401 N 0.000
T265_05798 Opisthorchis viverrini T265_05798 N 0.000
TRE_0001759501 Trichobilharzia regenti TRE_0001759501 N 0.000
TsM_000416400 Taenia solium TsM_000416400 N 0.000