CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400045649
(
Solanum tuberosum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PGSC0003DMG400045649
T255737_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400096078
MADS box
13
58
SENVRNSILDRRETSLFKKAEELSILCDVEVAIIIFRLGKIQPITW
Links
Other
MADS box
family TFs
Other
Solanum tuberosum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400044231
Solanum tuberosum
PGSC0003DMG400044231
N
1.000
PGSC0003DMG400034608
Solanum tuberosum
PGSC0003DMG400034608
N
0.978
Solyc12g016170.1
Solanum lycopersicum
Solyc12g016170.1
N
0.933
Solyc12g016180.1
Solanum lycopersicum
Solyc12g016180.1
N
0.933
Solyc12g016150.1
Solanum lycopersicum
Solyc12g016150.1
N
0.889
PGSC0003DMG400044285
Solanum tuberosum
PGSC0003DMG400044285
N
0.800
Solyc12g017300.1
Solanum lycopersicum
Solyc12g017300.1
N
0.778
PGSC0003DMG400035476
Solanum tuberosum
PGSC0003DMG400035476
N
0.778