TRIUR3_27077 (Triticum urartu)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 TRIUR3_27077 T256686_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SOC1
M08425_2.00 		Arabidopsis thaliana
CCAAAAAWRGAAAND
HNTTTCYWTTTTTGG		 ChIP-chip
Mathelier et al.(2014)
MA0554.1 		0.708 0.708
SOC1
M10915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL20_01 		0.708 0.708
MADS50
M10968_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS50_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TRIUR3_27077-P1 MADS box 11 58

Links

Other MADS box family TFs
Other Triticum urartu TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRAES3BF009000040CFD_g Triticum aestivum TRAES3BF009000040CFD_g I 0.896
BRADI2G59120 Brachypodium distachyon BRADI2G59120 I 0.875
F775_43625 Aegilops tauschii F775_43625 I 0.875
TRIUR3_19056 Triticum urartu TRIUR3_19056 I 0.875
MLOC_12290 Hordeum vulgare MLOC_12290 I 0.854
TRIUR3_20985 Triticum urartu TRIUR3_20985 I 0.854
BRADI2G59187 Brachypodium distachyon BRADI2G59187 I 0.854
TRAES3BF009000010CFD_g Triticum aestivum TRAES3BF009000010CFD_g I 0.833
Sb03g006210 Sorghum bicolor Sb03g006210 I 0.833
Traes_4BL_B8FFB0854 Triticum aestivum Traes_4BL_B8FFB0854 I 0.833
Si004582m.g Setaria italica Si004582m.g I 0.833
Pavir.J02739 Panicum virgatum Pavir.J02739 I 0.833
TRIUR3_30872 Triticum urartu TRIUR3_30872 I 0.833
TRIUR3_21732 Triticum urartu TRIUR3_21732 I 0.814
LPERR01G36730 Leersia perrieri LPERR01G36730 I 0.812
GSMUA_AchrUn_randomG20290_001 Musa acuminata GSMUA_AchrUn_randomG20290_001 I 0.812
OMERI01G39210 Oryza meridionalis OMERI01G39210 I 0.812
BGIOSGA005076 Oryza indica BGIOSGA005076 I 0.812
ORGLA01G0361900 Oryza glaberrima ORGLA01G0361900 I 0.812
ONIVA01G48250 Oryza nivara ONIVA01G48250 I 0.812
OBART01G42170 Oryza barthii OBART01G42170 I 0.812
OB08G28340 Oryza brachyantha OB08G28340 I 0.812
OPUNC01G41110 Oryza punctata OPUNC01G41110 I 0.812
GRMZM2G320549 Zea mays GRMZM2G320549 I 0.812
MLOC_76418 Hordeum vulgare MLOC_76418 I 0.812
GSMUA_Achr11G15560_001 Musa acuminata GSMUA_Achr11G15560_001 I 0.812
F775_23758 Aegilops tauschii F775_23758 I 0.812
F775_00385 Aegilops tauschii F775_00385 I 0.812
TRIUR3_28473 Triticum urartu TRIUR3_28473 I 0.812
Traes_7DS_4DF7EB08F Triticum aestivum Traes_7DS_4DF7EB08F I 0.812
OGLUM01G46440 Oryza glumaepatula OGLUM01G46440 I 0.812
Traes_7AS_F568FCBF1 Triticum aestivum Traes_7AS_F568FCBF1 I 0.804
ORGLA08G0229900 Oryza glaberrima ORGLA08G0229900 I 0.792
BRADI3G41297 Brachypodium distachyon BRADI3G41297 I 0.792
OMERI06G13650 Oryza meridionalis OMERI06G13650 I 0.792
ONIVA08G24570 Oryza nivara ONIVA08G24570 I 0.792
BGIOSGA029053 Oryza indica BGIOSGA029053 I 0.792
TRIUR3_30073 Triticum urartu TRIUR3_30073 I 0.792
LPERR08G18330 Leersia perrieri LPERR08G18330 I 0.792
Sb03g044170 Sorghum bicolor Sb03g044170 I 0.792
OBART08G21560 Oryza barthii OBART08G21560 I 0.792
GRMZM2G171650 Zea mays GRMZM2G171650 I 0.792
ORUFI01G45590 Oryza rufipogon ORUFI01G45590 I 0.792
OS08G0531900 Oryza sativa OS08G0531900 I 0.792
OGLUM08G22840 Oryza glumaepatula OGLUM08G22840 I 0.792
ORUFI08G24040 Oryza rufipogon ORUFI08G24040 I 0.792
MADS51 Oryza sativa OS01G0922800 I 0.792
Pavir.J08622 Panicum virgatum Pavir.J08622 I 0.787
Pavir.Bb00005 Panicum virgatum Pavir.Bb00005 I 0.781
Pavir.J26790 Panicum virgatum Pavir.J26790 I 0.771
Si015525m.g Setaria italica Si015525m.g I 0.771
Sb07g026180 Sorghum bicolor Sb07g026180 I 0.771
OPUNC08G18260 Oryza punctata OPUNC08G18260 I 0.771
GSMUA_Achr8G09250_001 Musa acuminata GSMUA_Achr8G09250_001 I 0.771
BRADI3G00730 Brachypodium distachyon BRADI3G00730 I 0.771
Traes_7BS_4D5DE99CC Triticum aestivum Traes_7BS_4D5DE99CC I 0.767
Traes_6AS_D6ABA1D79 Triticum aestivum Traes_6AS_D6ABA1D79 I 0.750
Traes_6DS_2BAD7A60A Triticum aestivum Traes_6DS_2BAD7A60A I 0.750
GRMZM2G098986 Zea mays GRMZM2G098986 I 0.750
OPUNC08G19670 Oryza punctata OPUNC08G19670 I 0.750
Si014540m.g Setaria italica Si014540m.g I 0.750
OS06G0347700 Oryza sativa OS06G0347700 I 0.729
ORUFI10G17990 Oryza rufipogon ORUFI10G17990 I 0.729
MADS56 Oryza indica BGIOSGA033356 I 0.729
LPERR03G01640 Leersia perrieri LPERR03G01640 I 0.729
TRIUR3_32699 Triticum urartu TRIUR3_32699 I 0.729
MTR_8g033220 Medicago truncatula MTR_8g033220 I 0.729
F775_08627 Aegilops tauschii F775_08627 I 0.729
ORGLA10G0119200 Oryza glaberrima ORGLA10G0119200 I 0.729
LPERR10G12950 Leersia perrieri LPERR10G12950 I 0.729
ORUFI06G14980 Oryza rufipogon ORUFI06G14980 I 0.729
LPERR02G00370 Leersia perrieri LPERR02G00370 I 0.729
OBART10G16960 Oryza barthii OBART10G16960 I 0.729
Traes_1AL_6B108514B Triticum aestivum Traes_1AL_6B108514B I 0.729
Traes_4DL_5633C0561 Triticum aestivum Traes_4DL_5633C0561 I 0.729
Traes_1BL_F1D5BF5F8 Triticum aestivum Traes_1BL_F1D5BF5F8 I 0.729
Traes_1DL_D5BBCA2D0 Triticum aestivum Traes_1DL_D5BBCA2D0 I 0.729
Solyc08g080100.2 Solanum lycopersicum Solyc08g080100.2 I 0.729
BRADI3G32090 Brachypodium distachyon BRADI3G32090 I 0.729
PGSC0003DMG400022748 Solanum tuberosum PGSC0003DMG400022748 I 0.729
F775_10590 Aegilops tauschii F775_10590 I 0.729
F775_29801 Aegilops tauschii F775_29801 I 0.729
Si005133m.g Setaria italica Si005133m.g I 0.729
MADS56 Oryza sativa OS10G0536100 I 0.729
ORGLA06G0125600 Oryza glaberrima ORGLA06G0125600 I 0.729
OLONG_018231 Oryza longistaminata OLONG_018231 I 0.729
ONIVA06G16870 Oryza nivara ONIVA06G16870 I 0.729
OLONG_017665 Oryza longistaminata OLONG_017665 I 0.729
MDP0000314765 Malus domestica MDP0000314765 I 0.729
Pavir.Fa00163 Panicum virgatum Pavir.Fa00163 I 0.729
OB10G24040 Oryza brachyantha OB10G24040 I 0.729
OMERI06G15180 Oryza meridionalis OMERI06G15180 I 0.729
OMERI10G13430 Oryza meridionalis OMERI10G13430 I 0.729
BGIOSGA022872 Oryza indica BGIOSGA022872 I 0.729
OPUNC02G00040 Oryza punctata OPUNC02G00040 I 0.729
ONIVA10G18680 Oryza nivara ONIVA10G18680 I 0.729
OPUNC06G13170 Oryza punctata OPUNC06G13170 I 0.729
OGLUM06G15040 Oryza glumaepatula OGLUM06G15040 I 0.729
PK19764.1 Cannabis sativa PK19764.1 I 0.729
Lus10036543.g Linum usitatissimum Lus10036543.g I 0.729
OBART06G14060 Oryza barthii OBART06G14060 I 0.729
OGLUM10G16960 Oryza glumaepatula OGLUM10G16960 I 0.729
Thhalv10001632m.g Eutrema salsugineum Thhalv10001632m.g I 0.708
Pavir.Fb01587 Panicum virgatum Pavir.Fb01587 I 0.708
BRADI1G77020 Brachypodium distachyon BRADI1G77020 I 0.708
Pavir.Ia04538 Panicum virgatum Pavir.Ia04538 I 0.708
Pavir.J07457 Panicum virgatum Pavir.J07457 I 0.708
BGIOSGA007336 Oryza indica BGIOSGA007336 I 0.708
Pavir.J22336 Panicum virgatum Pavir.J22336 I 0.708
SapurV1A.0578s0130 Salix purpurea SapurV1A.0578s0130 I 0.708
BGIOSGA007333 Oryza indica BGIOSGA007333 I 0.708
Bo4g195720 Brassica oleracea Bo4g195720 I 0.708
gene19425-v1.0-hybrid Fragaria vesca gene19425-v1.0-hybrid I 0.708
Ca_16423 Cicer arietinum Ca_16423 I 0.708
Carubv10027093m.g Capsella rubella Carubv10027093m.g I 0.708
Pm018089 Prunus mume Pm018089 I 0.708
Cagra.0050s0134 Capsella grandiflora Cagra.0050s0134 I 0.708
Bostr.25993s0208 Boechera stricta Bostr.25993s0208 I 0.708
VIT_15s0048g01240 Vitis vinifera VIT_15s0048g01240 I 0.708
MDP0000148857 Malus domestica MDP0000148857 I 0.708
TRIUR3_22964 Triticum urartu TRIUR3_22964 I 0.708
Bra000393 Brassica rapa Bra000393 I 0.708
Carubv10024046m.g Capsella rubella Carubv10024046m.g I 0.708
Pavir.Da00991 Panicum virgatum Pavir.Da00991 I 0.708
BGIOSGA026939 Oryza indica BGIOSGA026939 I 0.708
Bo3g038880 Brassica oleracea Bo3g038880 I 0.708
Bra039324 Brassica rapa Bra039324 I 0.708
Sb07g021110 Sorghum bicolor Sb07g021110 I 0.708
ONIVA08G16700 Oryza nivara ONIVA08G16700 I 0.708
ONIVA03G01420 Oryza nivara ONIVA03G01420 I 0.708
ONIVA02G00370 Oryza nivara ONIVA02G00370 I 0.708
OB08G23110 Oryza brachyantha OB08G23110 I 0.708
OB06G22200 Oryza brachyantha OB06G22200 I 0.708
SOC1 Arabidopsis thaliana AT2G45660 D 0.708
OPUNC08G13690 Oryza punctata OPUNC08G13690 I 0.708
OPUNC03G01630 Oryza punctata OPUNC03G01630 I 0.708
OBART02G00360 Oryza barthii OBART02G00360 I 0.708
OMERI03G01730 Oryza meridionalis OMERI03G01730 I 0.708
OGLUM08G16360 Oryza glumaepatula OGLUM08G16360 I 0.708
OGLUM03G01750 Oryza glumaepatula OGLUM03G01750 I 0.708
OGLUM02G00350 Oryza glumaepatula OGLUM02G00350 I 0.708
OLONG_001786 Oryza longistaminata OLONG_001786 I 0.708
OLONG_010918 Oryza longistaminata OLONG_010918 I 0.708
OMERI02G09250 Oryza meridionalis OMERI02G09250 I 0.708
OBART03G01800 Oryza barthii OBART03G01800 I 0.708
OLONG_011763 Oryza longistaminata OLONG_011763 I 0.708
Traes_1AL_6F5982F88 Triticum aestivum Traes_1AL_6F5982F88 I 0.708
OPUNC10G15300 Oryza punctata OPUNC10G15300 I 0.708
GSMUA_Achr5G20280_001 Musa acuminata GSMUA_Achr5G20280_001 I 0.708
PRUPE_ppa014428mg Prunus persica PRUPE_ppa014428mg I 0.708
POPTR_0014s07020 Populus trichocarpa POPTR_0014s07020 I 0.708
GRMZM2G171365 Zea mays GRMZM2G171365 I 0.708
Si038299m.g Setaria italica Si038299m.g I 0.708
GRMZM2G070034 Zea mays GRMZM2G070034 I 0.708
Si014885m.g Setaria italica Si014885m.g I 0.708
AGL20 Arabidopsis lyrata scaffold_403512.1 I 0.708
OB03G11760 Oryza brachyantha OB03G11760 I 0.708
POPTR_0012s10190 Populus trichocarpa POPTR_0012s10190 I 0.708
ORUFI02G00390 Oryza rufipogon ORUFI02G00390 I 0.708
ORGLA03G0015400 Oryza glaberrima ORGLA03G0015400 I 0.708
ORGLA02G0003200 Oryza glaberrima ORGLA02G0003200 I 0.708
ORUFI03G01510 Oryza rufipogon ORUFI03G01510 I 0.708
LPERR08G12860 Leersia perrieri LPERR08G12860 I 0.708
MADS50 Oryza sativa OS03G0122600 D 0.708
OS02G0104100 Oryza sativa OS02G0104100 I 0.708
Si038257m.g Setaria italica Si038257m.g I 0.708
Pavir.Ia02902 Panicum virgatum Pavir.Ia02902 I 0.702
Pavir.J19662 Panicum virgatum Pavir.J19662 I 0.702