CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29739.m003627
(
Ricinus communis
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
29739.m003627
T257145_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29739.m003627
MADS box
10
57
RLESVKARQVKYSKRKLGVLKKGKELATLCDVDLGLIMFSPSGKPSLY
Links
Other
MADS box
family TFs
Other
Ricinus communis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGL33
Populus trichocarpa
POPTR_0018s08400
N
0.771
Ciclev10010259m.g
Citrus clementina
Ciclev10010259m.g
N
0.761
SapurV1A.0435s0010
Salix purpurea
SapurV1A.0435s0010
N
0.750
TCM_037394
Theobroma cacao
TCM_037394
N
0.708