AGL33 (Populus trichocarpa)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 POPTR_0018s08400 T255882_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0018s08400.1 MADS box 10 57

Links

Other MADS box family TFs
Other Populus trichocarpa TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SapurV1A.0435s0010 Salix purpurea SapurV1A.0435s0010 N 0.896
Ciclev10010259m.g Citrus clementina Ciclev10010259m.g N 0.848
TCM_037394 Theobroma cacao TCM_037394 N 0.812
Gorai.001G074200 Gossypium raimondii Gorai.001G074200 I 0.786
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.783
cassava46162.m1 Manihot esculenta cassava46162.m1 I 0.771
29739.m003627 Ricinus communis 29739.m003627 N 0.771
PK21701.1 Cannabis sativa PK21701.1 I 0.771
Bra025685 Brassica rapa Bra025685 I 0.766
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.761
Cla010361 Citrullus lanatus Cla010361 I 0.761
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.761
Bo8g068060 Brassica oleracea Bo8g068060 I 0.750
Bra016544 Brassica rapa Bra016544 I 0.750
Gorai.012G090100 Gossypium raimondii Gorai.012G090100 N 0.750
Gorai.012G090200 Gossypium raimondii Gorai.012G090200 N 0.750
Gorai.010G096200 Gossypium raimondii Gorai.010G096200 N 0.750
Gorai.012G090000 Gossypium raimondii Gorai.012G090000 N 0.750
Bo8g104060 Brassica oleracea Bo8g104060 I 0.750
Bra031049 Brassica rapa Bra031049 I 0.750
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.745
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.739
GRMZM2G441115 Zea mays GRMZM2G441115 I 0.739
30138.m004061 Ricinus communis 30138.m004061 I 0.729
Gorai.008G194100 Gossypium raimondii Gorai.008G194100 I 0.729
Gorai.010G096100 Gossypium raimondii Gorai.010G096100 N 0.729
Lus10019089.g Linum usitatissimum Lus10019089.g I 0.729
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I 0.729
GSMUA_Achr3G24170_001 Musa acuminata GSMUA_Achr3G24170_001 I 0.729
TCM_014051 Theobroma cacao TCM_014051 I 0.729
Gorai.012G090300 Gossypium raimondii Gorai.012G090300 N 0.729
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.723
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.723
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.723
MDP0000146231 Malus domestica MDP0000146231 I 0.717
Lus10037166.g Linum usitatissimum Lus10037166.g N 0.717
29813.m001508 Ricinus communis 29813.m001508 I 0.717
MLOC_11474 Hordeum vulgare MLOC_11474 I 0.717
GSMUA_Achr11G14240_001 Musa acuminata GSMUA_Achr11G14240_001 N 0.717
GLYMA17G10941 Glycine max GLYMA17G10941 I 0.717
F775_13266 Aegilops tauschii F775_13266 I 0.717
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.717
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I 0.717
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.717
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.717
Pm006479 Prunus mume Pm006479 I 0.717
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.717
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.717
MDP0000773068 Malus domestica MDP0000773068 I 0.711
MDP0000146415 Malus domestica MDP0000146415 I 0.711
MDP0000919323 Malus domestica MDP0000919323 I 0.711
cassava19791.m1 Manihot esculenta cassava19791.m1 I 0.708
MTR_4g108720 Medicago truncatula MTR_4g108720 I 0.708
Eucgr.B00522 Eucalyptus grandis Eucgr.B00522 I 0.708
Lus10034464.g Linum usitatissimum Lus10034464.g I 0.708
GSMUA_Achr2G01740_001 Musa acuminata GSMUA_Achr2G01740_001 I 0.702