CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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snap_masked-nMf.1.1.scaf02542-processed-gene-0.2
(
Meloidogyne floridensis
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
snap_masked-nMf.1.1.scaf02542-processed-gene-0.2
T259642_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
snap_masked-nMf.1.1.scaf02542-processed-gene-0.2-mRNA-1
MADS box
108
154
YIGNKLRRYTTFSKRKTGIMKKIMAAQKLPSAKVRLVSLFFNDNVTQ
Links
Other
MADS box
family TFs
Other
Meloidogyne floridensis
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AEPI007009
Anopheles epiroticus
AEPI007009
I
0.955
AFUN006149
Anopheles funestus
AFUN006149
I
0.955
AQUA001309
Anopheles quadriannulatus
AQUA001309
I
0.913
ACOM041695
Anopheles coluzzii
ACOM041695
I
0.913
CpipJ_CPIJ016459
Culex pipiens
CpipJ_CPIJ016459
I
0.913
AGAP010511
Anopheles gambiae
AGAP010511
I
0.913
AFAF006302
Anopheles farauti
AFAF006302
I
0.913
CPIJ016459
Culex quinquefasciatus
CPIJ016459
I
0.913
AARA006326
Anopheles arabiensis
AARA006326
I
0.913
AMEC009624
Anopheles melas
AMEC009624
I
0.913
LCUP011662
Lucilia cuprina
LCUP011662
I
0.875
BGIBMGA001382
Bombyx mori
BGIBMGA001382
I
0.875
HMEL017831
Heliconius melpomene
HMEL017831
I
0.875
KGM_22252
Danaus plexippus
KGM_22252
I
0.875
ASTEI07121
Anopheles stephensi
ASTEI07121
I
0.875
LDEC007646
Leptinotarsa decemlineata
LDEC007646
I
0.875
AALB009947
Anopheles albimanus
AALB009947
I
0.840
OFLC_0001346401
Onchocerca flexuosa
OFLC_0001346401
I
0.815
RPRC001752
Rhodnius prolixus
RPRC001752
I
0.778