PGSC0003DMG400028533 (Solanum tuberosum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 PGSC0003DMG400028533 T260863_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400073451 MBD 12 84

Links

Other MBD family TFs
Other Solanum tuberosum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc06g068140.2 Solanum lycopersicum Solyc06g068140.2 N 0.932
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.833
Pm013666 Prunus mume Pm013666 N 0.763
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.750
MDP0000462461 Malus domestica MDP0000462461 N 0.741
MBD11 Arabidopsis thaliana AT3G15790 N 0.740
MBD11 Arabidopsis lyrata scaffold_301848.1 N 0.740
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.740
Cla012920 Citrullus lanatus Cla012920 N 0.730
Bra027207 Brassica rapa Bra027207 N 0.726
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.716
Cla016961 Citrullus lanatus Cla016961 N 0.712
Cucsa.132180 Cucumis sativus Cucsa.132180 N 0.712
Lus10002168.g Linum usitatissimum Lus10002168.g N 0.712
Ca_19192 Cicer arietinum Ca_19192 N 0.703
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.703