CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00009p00263240
(
Amborella trichopoda
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
AMTR_s00009p00263240
T266146_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q948S5_TOBAC
M11074_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBA2_01
0.690
0.732
PC-MYB1
M07110_2.00
Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN
Dap-seq
OMalley et al.(2016)
MYB3R1_col_a
0.687
0.717
PC-MYB1
M07111_2.00
Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH
Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a
0.687
0.717
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERM95170
Myb
47
93
KGNWTEEEDAILMQAVKQFNGKNWKQIAKCFNDRADVQCLHRWQKVL
ERM95170
Myb
99
145
KGPWTKEEDDEIVKQVEKLGTKKWSVVAQSLPGRIGKQCRERWYNQL
ERM95170
Myb
151
194
KEPWTQEEDCVLIHAHQIYGNKWAEIAKFIPGRTDNSIKNYWNC
Links
Other
Myb/SANT
family TFs
Other
Amborella trichopoda
TFs
78 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy