MYB3R4 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT5G11510 T266528_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R4
M07125_2.00		 Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R4_col_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.783 0.871
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.757 0.835
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.757 0.835
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.727 0.842
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G11510.1 Myb 29 75
AT5G11510.1 Myb 81 127
AT5G11510.1 Myb 133 177
AT5G11510.2 Myb 29 75
AT5G11510.2 Myb 81 127
AT5G11510.2 Myb 133 177
AT5G11510.3 Myb 29 75
AT5G11510.3 Myb 81 127
AT5G11510.3 Myb 133 177
AT5G11510.4 Myb 29 75
AT5G11510.4 Myb 81 127
AT5G11510.4 Myb 133 177
AT5G11510.5 Myb 29 75
AT5G11510.5 Myb 81 127
AT5G11510.5 Myb 133 177

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

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101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action