CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G121111
(
Zea mays
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GRMZM2G121111
T272043_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q8RUX5_MAIZE
M11060_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MRP1_Q2
0.716
0.822
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G121111_P01
Myb
125
170
FWTLEEHRNFLRGLRVYGRGNWKNISKDFVTTKTPVQVSSHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Zea mays
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb09g003290
Sorghum bicolor
Sb09g003290
N
0.820
Sb09g003300
Sorghum bicolor
Sb09g003300
N
0.820
Sb10g009580
Sorghum bicolor
Sb10g009580
I
0.808
Sb10g009650
Sorghum bicolor
Sb10g009650
N
0.800
Sb10g007420
Sorghum bicolor
Sb10g007420
N
0.796
Sb01g029290
Sorghum bicolor
Sb01g029290
N
0.767
AC232321.1_FG008
Zea mays
AC232321.1_FG008
N
0.750
Si007889m.g
Setaria italica
Si007889m.g
I
0.742
Pavir.J01189
Panicum virgatum
Pavir.J01189
I
0.734
Pavir.Ga00772
Panicum virgatum
Pavir.Ga00772
N
0.733
Si032375m.g
Setaria italica
Si032375m.g
N
0.721
Sb09g003390
Sorghum bicolor
Sb09g003390
I
0.716
Q8RUX5_MAIZE
Zea mays
Q8RUX5_MAIZE
D
0.716
GRMZM2G111306
Zea mays
GRMZM2G111306
I
0.716
F775_03070
Aegilops tauschii
F775_03070
I
0.712
OPUNC06G04640
Oryza punctata
OPUNC06G04640
I
0.712
Si007873m.g
Setaria italica
Si007873m.g
N
0.698
Pavir.Ca01212
Panicum virgatum
Pavir.Ca01212
N
0.687
Sb10g006570
Sorghum bicolor
Sb10g006570
I
0.687
TRIUR3_35104
Triticum urartu
TRIUR3_35104
I
0.686
AC199820.4_FG006
Zea mays
AC199820.4_FG006
N
0.683
GRMZM2G422083
Zea mays
GRMZM2G422083
N
0.679
F775_29040
Aegilops tauschii
F775_29040
I
0.676
TRIUR3_31684
Triticum urartu
TRIUR3_31684
I
0.676
BGIOSGA021812
Oryza indica
BGIOSGA021812
N
0.671
ORGLA06G0044500
Oryza glaberrima
ORGLA06G0044500
N
0.671
ORUFI06G04920
Oryza rufipogon
ORUFI06G04920
N
0.671
BGIOSGA021814
Oryza indica
BGIOSGA021814
N
0.671
ONIVA06G15060
Oryza nivara
ONIVA06G15060
N
0.671
ONIVA06G15070
Oryza nivara
ONIVA06G15070
N
0.671
OGLUM06G05040
Oryza glumaepatula
OGLUM06G05040
N
0.671
BGIOSGA021811
Oryza indica
BGIOSGA021811
N
0.671
OB06G14500
Oryza brachyantha
OB06G14500
N
0.669
F775_23426
Aegilops tauschii
F775_23426
N
0.665
F775_23301
Aegilops tauschii
F775_23301
N
0.665
TRIUR3_31433
Triticum urartu
TRIUR3_31433
N
0.665
TRIUR3_33433
Triticum urartu
TRIUR3_33433
N
0.665
Si025176m.g
Setaria italica
Si025176m.g
I
0.662