CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_5g038910
(
Medicago truncatula
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
MTR_5g038910
T274858_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB124
M01267_2.00
Arabidopsis thaliana
NNVCGCKCBN
NVGMGCGBNN
PBM
Lambert et al.(2019)
pTH11556
0.817
0.890
MYB88
M07042_2.00
Arabidopsis thaliana
NNNHNACGCKCCDHH
DDHGGMGCGTNDNNN
Dap-seq
OMalley et al.(2016)
MYB88_col_a
0.780
0.857
MYB88
M07043_2.00
Arabidopsis thaliana
NNNACGCTCCHNN
NNDGGAGCGTNNN
Dap-seq
OMalley et al.(2016)
MYB88_colamp_a
0.780
0.857
MYB88
M11038_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB88_01
0.780
0.857
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES96593
Myb
27
72
VTWTQEEDDILRDQIGIHGTENWAIIASKFKDKTTRQCRRRWYTYL
AES96593
Myb
78
122
KGGWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTL
KEH27808
Myb
27
72
VTWTQEEDDILRDQIGIHGTENWAIIASKFKDKTTRQCRRRWYTYL
KEH27808
Myb
78
122
KGGWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTL
Links
Other
Myb/SANT
family TFs
Other
Medicago truncatula
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy