Cmyd_10015187 (Chelonia mydas)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cmyd_10015187 T283353_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mybl2
M00807_2.00 		Mus musculus
HAACSGHYN
NRDCSGTTD		 PBM
Weirauch et al.(2013)
pTH3712 		0.861 0.929
MYBL2
M03345_2.00 		Homo sapiens
RDMSGTTAACSGTT
AACSGTTAACSKHY		 SELEX
Jolma et al.(2013)
MYBL2_1 		0.861 0.929
MYBL2
M03346_2.00 		Homo sapiens
RCCGTTAVRACCGTTA
TAACGGTYBTAACGGY		 SELEX
Jolma et al.(2013)
MYBL2_2 		0.861 0.929
MYBL2
M03347_2.00 		Homo sapiens
NNRACCGTTWN
NWAACGGTYNN		 SELEX
Jolma et al.(2013)
MYBL2_3 		0.861 0.929
MYBL2
M03348_2.00 		Homo sapiens
RDCCGTTWAACBGHY
RDCVGTTWAACGGHY		 SELEX
Jolma et al.(2013)
MYBL2_4 		0.861 0.929
MYBL2
M05561_2.00 		Homo sapiens
NWAACSGTYDN
NHRACSGTTWN		 SELEX
Yin et al.(2017)
MYBL2_eDBD_HT-SELEX 		0.861 0.929
MYBL2
M09600_2.00 		Homo sapiens
NHAACNGHYN
NRDCNGTTDN		 Misc
Heinz et al.(2010)
Hela-BMYB_GSE27030 		0.861 0.929
MYBL2
M05562_2.00 		Homo sapiens
NHRACSGTYDN
NHRACSGTYDN		 SELEX
Yin et al.(2017)
MYBL2_eDBD_Methyl-HT-SELEX 		0.861 0.929
Myb
M00179_2.00 		Mus musculus
HAACGGHHNN
NNDDCCGTTD		 PBM
Badis et al.(2009)
Myb_1047 		0.662 0.764
MYB
M08150_2.00 		Homo sapiens
NNCAACTGHN
NDCAGTTGNN		 ChIP-seq
Mathelier et al.(2014)
MA0100.3 		0.662 0.764
MYB
M09260_2.00 		Homo sapiens
NYAACKGYYDNH
DNHRRCMGTTRN		 Misc
Kulakovskiy et al.(2013)
MYB_HUMAN.H11MO.0.A 		0.662 0.764
Myb
M09261_2.00 		Mus musculus
NYAACKGHHNBN
NVNDDCMGTTRN		 Misc
Kulakovskiy et al.(2013)
MYB_MOUSE.H11MO.0.A 		0.662 0.764
Myb
M09601_2.00 		Mus musculus
YAACBGYC
GRCVGTTR		 Misc
Heinz et al.(2010)
ERMYB-Myb_GSE22095 		0.662 0.764
MYB
M11050_2.00 		Homo sapiens
CMVNCAACBGYCNBYNBV
BVNRVNGRCVGTTGNBKG		 Transfac
Matys et al.(2006)
V$CMYB_01 		0.662 0.764
MYB
M11051_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CMYB_Q5 		0.662 0.764
MYB
M11052_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYB_Q3 		0.662 0.764
MYB
M11053_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYB_Q4 		0.662 0.764
MYB
M11054_2.00 		Homo sapiens
VNNAACKDBB
VVHMGTTNNB		 Transfac
Matys et al.(2006)
V$MYB_Q6 		0.662 0.764
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10015187 Myb 47 93
Cmyd_10015187 Myb 99 145
Cmyd_10015187 Myb 151 196

Links

Other Myb/SANT family TFs
Other Chelonia mydas TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPSIG00000016162 Pelodiscus sinensis ENSPSIG00000016162 I 0.892
Alligator_sinensis_CCG014289.1 Alligator sinensis Alligator_sinensis_CCG014289.1 I 0.875
MYBL2 Monodelphis domestica ENSMODG00000001228 I 0.868
ENSSHAG00000005654 Sarcophilus harrisii ENSSHAG00000005654 I 0.868
ENSMPUG00000017680 Mustela putorius furo ENSMPUG00000017680 I 0.861
Mybl2 Mus musculus ENSMUSG00000017861 D 0.861
MYBL2 Felis catus ENSFCAG00000011141 I 0.861
MYBL2 Homo sapiens ENSG00000101057 D 0.861
MYBL2 Loxodonta africana ENSLAFG00000006698 I 0.861
ENSPANG00000023992 Papio anubis ENSPANG00000023992 I 0.861
ENSPPYG00000011022 Pongo abelii ENSPPYG00000011022 I 0.861
MYBL2 Tursiops truncatus ENSTTRG00000013493 I 0.861
ENSMMUP00000023843 Macaca fascicularis ENSMMUP00000023843 I 0.861
Mybl2 Rattus norvegicus ENSRNOG00000007805 I 0.861
MYBL2 Pan troglodytes ENSPTRG00000013510 I 0.861
MYBL2 Equus caballus ENSECAG00000005925 I 0.861
MYBL2 Procavia capensis ENSPCAG00000004366 I 0.861
MYBL2 Oryctolagus cuniculus ENSOCUG00000005775 I 0.861
MYBL2 Cavia porcellus ENSCPOG00000020458 I 0.861
MYBL2 Canis familiaris ENSCAFG00000009336 I 0.861
ENSCSAG00000014069 Chlorocebus sabaeus ENSCSAG00000014069 I 0.861
ENSCJAG00000017819 Callithrix jacchus ENSCJAG00000017819 I 0.861
ENSOARG00000003547 Ovis aries ENSOARG00000003547 I 0.852
Brh_R006404 Buceros rhinoceros Brh_R006404 I 0.850
MYBL2 Bos taurus ENSBTAG00000007783 I 0.850
MYBL2 Otolemur garnettii ENSOGAG00000007702 I 0.850
ENSP00000217026-D1 Bos grunniens ENSP00000217026-D1 I 0.850
Aan_R003280 Calypte anna Aan_R003280 I 0.849
Gfo_R005427 Geospiza fortis Gfo_R005427 I 0.849
ENSTGUG00000004426 Taeniopygia guttata ENSTGUG00000004426 I 0.849
Tal_R007942 Tyto alba Tal_R007942 I 0.849
Afo_R009791 Aptenodytes forsteri Afo_R009791 I 0.849
MYBL2 Meleagris gallopavo ENSMGAG00000002972 I 0.849
ENSAPLG00000005213 Anas platyrhynchos ENSAPLG00000005213 I 0.849
MYBL2 Gallus gallus ENSGALG00000003503 I 0.849
MYBL2 Macaca mulatta ENSMMUG00000018137 I 0.841
ENSAMEG00000003831 Ailuropoda melanoleuca ENSAMEG00000003831 I 0.836
MYBL2 Sus scrofa ENSSSCG00000007366 I 0.831
MYBL2 Erinaceus europaeus ENSEEUG00000007817 I 0.831
ENSSTOG00000010149 Ictidomys tridecemlineatus ENSSTOG00000010149 I 0.829
Myotis_brandtii_MYBL2_10025179 Myotis brandtii Myotis_brandtii_MYBL2_10025179 I 0.825
MYBL2 Myotis lucifugus ENSMLUG00000016678 I 0.825
Mybl2 Dipodomys ordii ENSDORG00000006855 I 0.823
ENSFALG00000005745 Ficedula albicollis ENSFALG00000005745 I 0.820
ENSLACG00000018995 Latimeria chalumnae ENSLACG00000018995 I 0.818
ENSOANG00000011081 Ornithorhynchus anatinus ENSOANG00000011081 I 0.802
Ogr13963 Ophisaurus gracilis Ogr13963 I 0.789
MYBL2 Anolis carolinensis ENSACAG00000002463 I 0.789
Pvit_07752 Pogona vitticeps Pvit_07752 I 0.771
MYBL2 Ochotona princeps ENSOPRG00000009014 I 0.744
ENSLOCG00000001337 Lepisosteus oculatus ENSLOCG00000001337 I 0.741
ENSCJAG00000031864 Callithrix jacchus ENSCJAG00000031864 I 0.741
mybl2 Xenopus tropicalis XB-GENE-982419 I 0.737
mybl2.S Xenopus laevis XB-GENE-982423 I 0.719
S33643 Xenopus laevis S33643 I 0.719
MYBL2 Pteropus vampyrus ENSPVAG00000001218 I 0.712
ENSNLEG00000006566 Nomascus leucogenys ENSNLEG00000006566 I 0.705
mybl2b Danio rerio ENSDARG00000032264 I 0.687
ENSGMOG00000014402 Gadus morhua ENSGMOG00000014402 N 0.672
myb Xenopus tropicalis XB-GENE-867553 I 0.665
XP_002935855 Xenopus tropicalis XP_002935855 I 0.665
MYB Gallus gallus ENSGALG00000013956 I 0.665
ENSLACG00000002813 Latimeria chalumnae ENSLACG00000002813 I 0.665
ENSAMEG00000009813 Ailuropoda melanoleuca ENSAMEG00000009813 I 0.662
MYB Tupaia belangeri ENSTBEG00000016454 I 0.662
MYB Taeniopygia guttata ENSTGUG00000011495 I 0.662
ENSTSYG00000014301 Tarsius syrichta ENSTSYG00000014301 I 0.662
MYB Tursiops truncatus ENSTTRG00000003718 I 0.662
Cmyd_10011933 Chelonia mydas Cmyd_10011933 I 0.662
ENSP00000339992 Macaca fascicularis ENSP00000339992 I 0.662
Myotis_brandtii_MYB_10035701 Myotis brandtii Myotis_brandtii_MYB_10035701 I 0.662
Pvit_17294 Pogona vitticeps Pvit_17294 I 0.662
Tal_R007653 Tyto alba Tal_R007653 I 0.662
ENSSTOG00000007581 Ictidomys tridecemlineatus ENSSTOG00000007581 I 0.662
ENSP00000339992-D1 Bos grunniens ENSP00000339992-D1 I 0.662
Afo_R014904 Aptenodytes forsteri Afo_R014904 I 0.662
Alligator_sinensis_CCG012608.1 Alligator sinensis Alligator_sinensis_CCG012608.1 I 0.662
Brh_R005747 Buceros rhinoceros Brh_R005747 I 0.662
MYB Anolis carolinensis ENSACAG00000009861 I 0.662
Aan_R009776 Calypte anna Aan_R009776 I 0.662
MYB Procavia capensis ENSPCAG00000009197 I 0.662
MYB Myotis lucifugus ENSMLUG00000002125 I 0.662
MYB Microcebus murinus ENSMICG00000005531 I 0.662
MYB Meleagris gallopavo ENSMGAG00000013053 I 0.662
MYB Macaca mulatta ENSMMUG00000018166 I 0.662
MYB Monodelphis domestica ENSMODG00000017488 I 0.662
Myb Mus musculus ENSMUSG00000019982 D 0.662
MYB Callithrix jacchus ENSCJAG00000007798 I 0.662
MYB Loxodonta africana ENSLAFG00000018350 I 0.662
MYB Cavia porcellus ENSCPOG00000014607 I 0.662
MYB Equus caballus ENSECAG00000009918 I 0.662
ENSCSAG00000016815 Chlorocebus sabaeus ENSCSAG00000016815 I 0.662
MYB Dasypus novemcinctus ENSDNOG00000047370 I 0.662
MYB Erinaceus europaeus ENSEEUG00000001468 I 0.662
ENSFALG00000011914 Ficedula albicollis ENSFALG00000011914 I 0.662
MYB Homo sapiens ENSG00000118513 D 0.662
MYB Felis catus ENSFCAG00000001812 I 0.662
ENSNLEG00000014751 Nomascus leucogenys ENSNLEG00000014751 I 0.662
MYB Ornithorhynchus anatinus ENSOANG00000002777 I 0.662
MYB Pan troglodytes ENSPTRG00000018631 I 0.662
MYB Bos taurus ENSBTAG00000012074 I 0.662
MYB Pteropus vampyrus ENSPVAG00000007652 I 0.662
ENSAPLG00000007728 Anas platyrhynchos ENSAPLG00000007728 I 0.662
ENSSHAG00000014728 Sarcophilus harrisii ENSSHAG00000014728 I 0.662
MYB Sorex araneus ENSSARG00000002855 I 0.662
ENSPSIG00000011892 Pelodiscus sinensis ENSPSIG00000011892 I 0.662
MYB Canis familiaris ENSCAFG00000000230 I 0.662
MYB Otolemur garnettii ENSOGAG00000000056 I 0.662
MYB Oryctolagus cuniculus ENSOCUG00000011633 I 0.662
ENSOARG00000014901 Ovis aries ENSOARG00000014901 I 0.662
MYB Ochotona princeps ENSOPRG00000013639 I 0.662
ENSPANG00000018932 Papio anubis ENSPANG00000018932 I 0.662
MYB Sus scrofa ENSSSCG00000004167 I 0.662
MYB Choloepus hoffmanni ENSCHOG00000010472 I 0.662
ENSXMAG00000007939 Xiphophorus maculatus ENSXMAG00000007939 N 0.661