29790.m000831 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 29790.m000831 T283791_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EFM
M07044_2.00 		Arabidopsis thaliana
NNGAATATTCY
RGAATATTCNN		 Dap-seq
OMalley et al.(2016)
At2g03500_col_a 		0.734 0.766
EFM
M07045_2.00 		Arabidopsis thaliana
RGAATCHWAGATTC
GAATCTWDGATTCY		 Dap-seq
OMalley et al.(2016)
At2g03500_colamp_a 		0.734 0.766
NIGT1
M02328_2.00 		Oryza sativa
NNKATHCNNN
NNNGDATMNN		 PBM
Weirauch et al.(2014)
pTH8646 		0.668 0.745
PK19779.1
M02354_2.00 		Cannabis sativa
NNKATNCNNN
NNNGNATMNN		 PBM
Weirauch et al.(2014)
pTH9610 		0.668 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29790.m000831 Myb 202 253

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm015406 Prunus mume Pm015406 N 0.758
cassava24190.valid.m1 Manihot esculenta cassava24190.valid.m1 I 0.734
Gorai.009G022100 Gossypium raimondii Gorai.009G022100 I 0.734
MTR_4g113140 Medicago truncatula MTR_4g113140 I 0.734
Cla017007 Citrullus lanatus Cla017007 I 0.734
PGSC0003DMG400030389 Solanum tuberosum PGSC0003DMG400030389 I 0.734
Gorai.001G002800 Gossypium raimondii Gorai.001G002800 I 0.734
POPTR_0006s16000 Populus trichocarpa POPTR_0006s16000 I 0.734
MDP0000128135 Malus domestica MDP0000128135 I 0.734
Lus10043304.g Linum usitatissimum Lus10043304.g I 0.734
orange1.1g011048m.g Citrus sinensis orange1.1g011048m.g I 0.734
Cucsa.082250 Cucumis sativus Cucsa.082250 I 0.734
Bostr.0556s0172 Boechera stricta Bostr.0556s0172 I 0.734
Eucgr.C04155 Eucalyptus grandis Eucgr.C04155 I 0.734
Ciclev10008096m.g Citrus clementina Ciclev10008096m.g I 0.734
Carubv10017308m.g Capsella rubella Carubv10017308m.g I 0.734
Aquca_001_00694 Aquilegia coerulea Aquca_001_00694 I 0.734
Cla012503 Citrullus lanatus Cla012503 I 0.734
scaffold_500333.1 Arabidopsis lyrata scaffold_500333.1 I 0.734
evm.TU.supercontig_127.55 Carica papaya evm.TU.supercontig_127.55 I 0.734
Cucsa.116140 Cucumis sativus Cucsa.116140 I 0.734
gene30953-v1.0-hybrid Fragaria vesca gene30953-v1.0-hybrid I 0.734
GSMUA_Achr10G27180_001 Musa acuminata GSMUA_Achr10G27180_001 I 0.734
Bo7g081380 Brassica oleracea Bo7g081380 I 0.734
Bra025115 Brassica rapa Bra025115 I 0.734
Bra026548 Brassica rapa Bra026548 I 0.734
SapurV1A.0246s0200 Salix purpurea SapurV1A.0246s0200 I 0.734
Bo2g137000 Brassica oleracea Bo2g137000 I 0.734
PRUPE_ppa016044mg Prunus persica PRUPE_ppa016044mg I 0.734
PK20621.1 Cannabis sativa PK20621.1 I 0.734
Thhalv10004257m.g Eutrema salsugineum Thhalv10004257m.g I 0.734
Solyc12g006800.1 Solanum lycopersicum Solyc12g006800.1 I 0.734
EFM Arabidopsis thaliana AT2G03500 D 0.734
Pm027466 Prunus mume Pm027466 I 0.734
POPTR_0018s06410 Populus trichocarpa POPTR_0018s06410 I 0.734
GLYMA05G08150 Glycine max GLYMA05G08150 I 0.734
GLYMA06G23902 Glycine max GLYMA06G23902 I 0.734
GLYMA17G12720 Glycine max GLYMA17G12720 I 0.734
GLYMA04G21680 Glycine max GLYMA04G21680 I 0.734
Cagra.3545s0007 Capsella grandiflora Cagra.3545s0007 I 0.734
29807.m000474 Ricinus communis 29807.m000474 I 0.734
cassava11434.m1 Manihot esculenta cassava11434.m1 I 0.734
VIT_11s0016g04600 Vitis vinifera VIT_11s0016g04600 I 0.734
Ca_06627 Cicer arietinum Ca_06627 I 0.734
Gorai.010G067300 Gossypium raimondii Gorai.010G067300 I 0.733
Gorai.001G206600 Gossypium raimondii Gorai.001G206600 N 0.724
TCM_019009 Theobroma cacao TCM_019009 I 0.724
PRUPE_ppa023507mg Prunus persica PRUPE_ppa023507mg N 0.705
Pavir.J16844 Panicum virgatum Pavir.J16844 I 0.697
Traes_5DS_13C2391DC Triticum aestivum Traes_5DS_13C2391DC I 0.690
OS12G0586300 Oryza sativa OS12G0586300 I 0.690
LPERR12G14470 Leersia perrieri LPERR12G14470 I 0.690
BRADI4G03160 Brachypodium distachyon BRADI4G03160 I 0.690
BGIOSGA037689 Oryza indica BGIOSGA037689 I 0.690
Traes_5BS_C9EA93E10 Triticum aestivum Traes_5BS_C9EA93E10 I 0.690
F775_03006 Aegilops tauschii F775_03006 I 0.690
ONIVA12G16020 Oryza nivara ONIVA12G16020 I 0.690
OGLUM12G18880 Oryza glumaepatula OGLUM12G18880 I 0.690
OLONG_018015 Oryza longistaminata OLONG_018015 I 0.690
OPUNC12G15670 Oryza punctata OPUNC12G15670 I 0.690
ORGLA12G0148200 Oryza glaberrima ORGLA12G0148200 I 0.690
OBART12G17240 Oryza barthii OBART12G17240 I 0.690
ORUFI12G19230 Oryza rufipogon ORUFI12G19230 I 0.690
cassava43327.valid.m1 Manihot esculenta cassava43327.valid.m1 I 0.683
Eucgr.G02343 Eucalyptus grandis Eucgr.G02343 I 0.683
Lus10019452.g Linum usitatissimum Lus10019452.g I 0.681
MDP0000231315 Malus domestica MDP0000231315 I 0.681
cassava2665.m1 Manihot esculenta cassava2665.m1 N 0.680
Eucgr.I01178 Eucalyptus grandis Eucgr.I01178 I 0.675
TRAES3BF056900070CFD_g Triticum aestivum TRAES3BF056900070CFD_g I 0.674
TCM_037970 Theobroma cacao TCM_037970 I 0.674
SapurV1A.1984s0010 Salix purpurea SapurV1A.1984s0010 I 0.674
SapurV1A.0512s0010 Salix purpurea SapurV1A.0512s0010 I 0.674
Pavir.J13382 Panicum virgatum Pavir.J13382 I 0.674
Pavir.Ca02525 Panicum virgatum Pavir.Ca02525 I 0.674
Pavir.Eb00363 Panicum virgatum Pavir.Eb00363 I 0.674
Pavir.J08752 Panicum virgatum Pavir.J08752 I 0.674
fgenesh1_pg.scaffold_166000054 Physcomitrella patens fgenesh1_pg.scaffold_166000054 I 0.674
Si001230m.g Setaria italica Si001230m.g I 0.674
GRMZM2G348238 Zea mays GRMZM2G348238 I 0.674
ONIVA01G05610 Oryza nivara ONIVA01G05610 I 0.674
F775_15336 Aegilops tauschii F775_15336 I 0.674
OMERI01G04960 Oryza meridionalis OMERI01G04960 I 0.674
GSMUA_Achr6G34680_001 Musa acuminata GSMUA_Achr6G34680_001 I 0.674
OPUNC01G04800 Oryza punctata OPUNC01G04800 I 0.674
OS01G0176700 Oryza sativa OS01G0176700 I 0.674
ORGLA01G0045900 Oryza glaberrima ORGLA01G0045900 I 0.674
GSMUA_Achr6G05330_001 Musa acuminata GSMUA_Achr6G05330_001 I 0.674
ORUFI01G05240 Oryza rufipogon ORUFI01G05240 I 0.674
LPERR01G04660 Leersia perrieri LPERR01G04660 I 0.674
Sb03g004090 Sorghum bicolor Sb03g004090 I 0.674
BRADI2G04810 Brachypodium distachyon BRADI2G04810 I 0.674
AMTR_s00122p00127250 Amborella trichopoda AMTR_s00122p00127250 I 0.674
OB01G14760 Oryza brachyantha OB01G14760 I 0.674
AC234520.1_FG003 Zea mays AC234520.1_FG003 I 0.674
Si022287m.g Setaria italica Si022287m.g I 0.674
BGIOSGA002879 Oryza indica BGIOSGA002879 I 0.674
SELMODRAFT_423260 Selaginella moellendorffii SELMODRAFT_423260 I 0.674
Sb08g019720 Sorghum bicolor Sb08g019720 I 0.674
AMTR_s00033p00241280 Amborella trichopoda AMTR_s00033p00241280 I 0.674
OGLUM01G05410 Oryza glumaepatula OGLUM01G05410 I 0.674
SELMODRAFT_402040 Selaginella moellendorffii SELMODRAFT_402040 I 0.674
GSMUA_Achr8G18270_001 Musa acuminata GSMUA_Achr8G18270_001 I 0.668
LPERR02G11880 Leersia perrieri LPERR02G11880 I 0.668
MLOC_72007 Hordeum vulgare MLOC_72007 I 0.668
Gorai.008G185500 Gossypium raimondii Gorai.008G185500 I 0.668
Pavir.Ab00626 Panicum virgatum Pavir.Ab00626 I 0.668
BRADI3G10730 Brachypodium distachyon BRADI3G10730 I 0.668
SapurV1A.1001s0050 Salix purpurea SapurV1A.1001s0050 I 0.668
AMTR_s00093p00110710 Amborella trichopoda AMTR_s00093p00110710 I 0.668
PK19779.1 Cannabis sativa PK19779.1 D 0.668
F775_13221 Aegilops tauschii F775_13221 I 0.668
GSMUA_Achr10G28540_001 Musa acuminata GSMUA_Achr10G28540_001 I 0.668
MDP0000703817 Malus domestica MDP0000703817 I 0.668
GSMUA_Achr11G13410_001 Musa acuminata GSMUA_Achr11G13410_001 I 0.668
Pavir.Aa02952 Panicum virgatum Pavir.Aa02952 I 0.668
OB02G22950 Oryza brachyantha OB02G22950 I 0.668
MDP0000202657 Malus domestica MDP0000202657 I 0.668
OMERI02G14870 Oryza meridionalis OMERI02G14870 I 0.668
POPTR_0010s13900 Populus trichocarpa POPTR_0010s13900 I 0.668
28883.m000751 Ricinus communis 28883.m000751 I 0.668
POPTR_0008s11630 Populus trichocarpa POPTR_0008s11630 I 0.668
cassava11986.valid.m1 Manihot esculenta cassava11986.valid.m1 I 0.668
NIGT1 Oryza sativa OS02G0325600 D 0.668
PGSC0003DMG400000828 Solanum tuberosum PGSC0003DMG400000828 I 0.668
Pm029019 Prunus mume Pm029019 I 0.668
PRUPE_ppa007222mg Prunus persica PRUPE_ppa007222mg I 0.668
Traes_2BS_10A8CAB27 Triticum aestivum Traes_2BS_10A8CAB27 I 0.668
Solyc05g009720.2 Solanum lycopersicum Solyc05g009720.2 I 0.668
SELMODRAFT_66160 Selaginella moellendorffii SELMODRAFT_66160 I 0.668
VIT_01s0011g03110 Vitis vinifera VIT_01s0011g03110 I 0.668
Sb08g003180 Sorghum bicolor Sb08g003180 I 0.668
Cla008104 Citrullus lanatus Cla008104 I 0.668
ORUFI02G14900 Oryza rufipogon ORUFI02G14900 I 0.668
Cucsa.365440 Cucumis sativus Cucsa.365440 I 0.668
OBART02G14690 Oryza barthii OBART02G14690 I 0.668
OGLUM02G14610 Oryza glumaepatula OGLUM02G14610 I 0.668
OPUNC02G13150 Oryza punctata OPUNC02G13150 I 0.668
ONIVA02G15910 Oryza nivara ONIVA02G15910 I 0.668
TCM_011857 Theobroma cacao TCM_011857 I 0.668
evm.TU.supercontig_1.213 Carica papaya evm.TU.supercontig_1.213 I 0.668
Aquca_026_00236 Aquilegia coerulea Aquca_026_00236 I 0.668
ORGLA02G0127400 Oryza glaberrima ORGLA02G0127400 I 0.668
mgf006847m Mimulus guttatus mgf006847m I 0.668
mgf007637m Mimulus guttatus mgf007637m I 0.666
Lus10034280.g Linum usitatissimum Lus10034280.g I 0.666
Lus10035043.g Linum usitatissimum Lus10035043.g I 0.661
Lus10041485.g Linum usitatissimum Lus10041485.g I 0.661
Lus10021699.g Linum usitatissimum Lus10021699.g I 0.661