cassava44568.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava44568.m1 T284297_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava44568.m1 Myb 264 309

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava20168.m1 Manihot esculenta cassava20168.m1 N 0.857
Ciclev10026033m.g Citrus clementina Ciclev10026033m.g N 0.836
orange1.1g037355m.g Citrus sinensis orange1.1g037355m.g N 0.836
VIT_17s0000g03540 Vitis vinifera VIT_17s0000g03540 N 0.823
Cla014299 Citrullus lanatus Cla014299 N 0.811
gene05559-v1.0-hybrid Fragaria vesca gene05559-v1.0-hybrid N 0.795
TCM_000914 Theobroma cacao TCM_000914 N 0.773
Gorai.007G058000 Gossypium raimondii Gorai.007G058000 N 0.762
Cucsa.103750 Cucumis sativus Cucsa.103750 N 0.762
GLYMA09G33600 Glycine max GLYMA09G33600 N 0.754
GLYMA01G02380 Glycine max GLYMA01G02380 N 0.754
28179.m000458 Ricinus communis 28179.m000458 N 0.737
POPTR_0018s04230 Populus trichocarpa POPTR_0018s04230 N 0.728
Gorai.003G035800 Gossypium raimondii Gorai.003G035800 N 0.724
PRUPE_ppa003947mg Prunus persica PRUPE_ppa003947mg N 0.711
Pm002284 Prunus mume Pm002284 N 0.711
Aquca_069_00025 Aquilegia coerulea Aquca_069_00025 N 0.704
Lus10002159.g Linum usitatissimum Lus10002159.g N 0.702
chr2.CM0177.470.nc Lotus japonicus chr2.CM0177.470.nc N 0.694
PK06741.1 Cannabis sativa PK06741.1 N 0.692
SapurV1A.0263s0050 Salix purpurea SapurV1A.0263s0050 N 0.692
POPTR_0006s29510 Populus trichocarpa POPTR_0006s29510 N 0.692
AMTR_s00044p00144500 Amborella trichopoda AMTR_s00044p00144500 N 0.683
MDP0000312273 Malus domestica MDP0000312273 N 0.680
PGSC0003DMG400000839 Solanum tuberosum PGSC0003DMG400000839 N 0.675
MTR_7g076850 Medicago truncatula MTR_7g076850 N 0.675
Solyc01g068540.2 Solanum lycopersicum Solyc01g068540.2 N 0.675
evm.TU.supercontig_129.20 Carica papaya evm.TU.supercontig_129.20 N 0.673
SapurV1A.0493s0270 Salix purpurea SapurV1A.0493s0270 N 0.672
Si021654m.g Setaria italica Si021654m.g N 0.664