Cucsa.311970 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.311970 T284515_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.311970.5 Myb 183 231

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.311950 Cucumis sativus Cucsa.311950 N 0.909
Cucsa.311960 Cucumis sativus Cucsa.311960 N 0.909
Cucsa.311940 Cucumis sativus Cucsa.311940 N 0.909
Cucsa.311930 Cucumis sativus Cucsa.311930 N 0.909
PK00855.1 Cannabis sativa PK00855.1 N 0.791
Eucgr.F02154 Eucalyptus grandis Eucgr.F02154 N 0.781
Solyc12g087970.1 Solanum lycopersicum Solyc12g087970.1 N 0.781
VIT_18s0001g07620 Vitis vinifera VIT_18s0001g07620 N 0.779
Solyc04g076360.2 Solanum lycopersicum Solyc04g076360.2 N 0.777
PGSC0003DMG400009342 Solanum tuberosum PGSC0003DMG400009342 N 0.777
Cla023409 Citrullus lanatus Cla023409 N 0.767
orange1.1g007452m.g Citrus sinensis orange1.1g007452m.g N 0.744
Ciclev10000622m.g Citrus clementina Ciclev10000622m.g N 0.744
AMTR_s00016p00255950 Amborella trichopoda AMTR_s00016p00255950 N 0.737
Cla022491 Citrullus lanatus Cla022491 N 0.736
evm.TU.supercontig_21.26 Carica papaya evm.TU.supercontig_21.26 N 0.732
Cucsa.160570 Cucumis sativus Cucsa.160570 N 0.726
29908.m006268 Ricinus communis 29908.m006268 N 0.724
cassava4465.m1 Manihot esculenta cassava4465.m1 N 0.706
cassava31065.valid.m1 Manihot esculenta cassava31065.valid.m1 N 0.706
MDP0000311848 Malus domestica MDP0000311848 N 0.698
POPTR_0002s10670 Populus trichocarpa POPTR_0002s10670 N 0.696
SapurV1A.0004s1050 Salix purpurea SapurV1A.0004s1050 N 0.696
GSMUA_Achr6G12970_001 Musa acuminata GSMUA_Achr6G12970_001 N 0.694
Gorai.002G139000 Gossypium raimondii Gorai.002G139000 N 0.692
Pm004407 Prunus mume Pm004407 N 0.691
PRUPE_ppa1027142mg Prunus persica PRUPE_ppa1027142mg N 0.691
fgenesh2_kg.1__1026__AT1G09710.1 Arabidopsis lyrata fgenesh2_kg.1__1026__AT1G09710.1 N 0.680
AT1G09710 Arabidopsis thaliana AT1G09710 N 0.680
Bostr.25494s0029 Boechera stricta Bostr.25494s0029 N 0.680
Cagra.4395s0155 Capsella grandiflora Cagra.4395s0155 N 0.680
Carubv10010985m.g Capsella rubella Carubv10010985m.g N 0.680
SapurV1A.0320s0130 Salix purpurea SapurV1A.0320s0130 N 0.671
Lus10042871.g Linum usitatissimum Lus10042871.g N 0.668
Lus10028172.g Linum usitatissimum Lus10028172.g N 0.668