estExt_Genewise1.C_360117 (Physcomitrella patens)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 estExt_Genewise1.C_360117 T284797_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_360117 Myb 14 61
estExt_Genewise1.C_360117 Myb 67 112

Links

Other Myb/SANT family TFs
Other Physcomitrella patens TFs

174 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gw1.65.181.1 Physcomitrella patens gw1.65.181.1 N 0.909
gw1.257.52.1 Physcomitrella patens gw1.257.52.1 N 0.756
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I 0.734
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I 0.721
BRADI2G05740 Brachypodium distachyon BRADI2G05740 N 0.711
GLYMA13G04920 Glycine max GLYMA13G04920 I 0.706
GLYMA19G02090 Glycine max GLYMA19G02090 I 0.706
cassava26191.m1 Manihot esculenta cassava26191.m1 N 0.701
Lus10028248.g Linum usitatissimum Lus10028248.g I 0.698
Lus10007248.g Linum usitatissimum Lus10007248.g I 0.698
OPUNC12G18070 Oryza punctata OPUNC12G18070 I 0.696
GSMUA_Achr4G32240_001 Musa acuminata GSMUA_Achr4G32240_001 I 0.694
MLOC_44167 Hordeum vulgare MLOC_44167 I 0.693
Traes_7DL_20EC9096A Triticum aestivum Traes_7DL_20EC9096A I 0.693
Solyc02g091980.1 Solanum lycopersicum Solyc02g091980.1 I 0.692
Lus10026543.g Linum usitatissimum Lus10026543.g I 0.692
Lus10013830.g Linum usitatissimum Lus10013830.g I 0.692
PGSC0003DMG400021401 Solanum tuberosum PGSC0003DMG400021401 I 0.692
GRMZM2G104789 Zea mays GRMZM2G104789 I 0.690
Lus10011606.g Linum usitatissimum Lus10011606.g I 0.690
Gorai.006G162800 Gossypium raimondii Gorai.006G162800 I 0.688
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I 0.686
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I 0.685
Cucsa.197410 Cucumis sativus Cucsa.197410 N 0.684
MDP0000124992 Malus domestica MDP0000124992 I 0.684
MDP0000262514 Malus domestica MDP0000262514 I 0.684
MDP0000786507 Malus domestica MDP0000786507 I 0.684
GSMUA_Achr10G08350_001 Musa acuminata GSMUA_Achr10G08350_001 I 0.683
GSMUA_Achr6G31740_001 Musa acuminata GSMUA_Achr6G31740_001 I 0.683
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I 0.682
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I 0.682
mgf017404m Mimulus guttatus mgf017404m I 0.681
Lus10036660.g Linum usitatissimum Lus10036660.g N 0.680
Solyc04g077260.2 Solanum lycopersicum Solyc04g077260.2 I 0.680
e_gw1.204.95.1 Physcomitrella patens e_gw1.204.95.1 N 0.680
PGSC0003DMG400004948 Solanum tuberosum PGSC0003DMG400004948 I 0.680
Lus10033119.g Linum usitatissimum Lus10033119.g N 0.680
e_gw1.46.242.1 Physcomitrella patens e_gw1.46.242.1 N 0.680
Eucgr.I00663 Eucalyptus grandis Eucgr.I00663 I 0.679
orange1.1g019787m.g Citrus sinensis orange1.1g019787m.g I 0.677
SELMODRAFT_132315 Selaginella moellendorffii SELMODRAFT_132315 N 0.677
ATMYB35 Populus trichocarpa POPTR_0017s11140 N 0.677
Ciclev10028804m.g Citrus clementina Ciclev10028804m.g I 0.677
SELMODRAFT_101484 Selaginella moellendorffii SELMODRAFT_101484 N 0.677
Traes_2DL_A03AB7608 Triticum aestivum Traes_2DL_A03AB7608 I 0.676
TCM_045715 Theobroma cacao TCM_045715 N 0.676
Traes_7AL_5B57EF9FC Triticum aestivum Traes_7AL_5B57EF9FC I 0.676
Traes_2BL_361925B62 Triticum aestivum Traes_2BL_361925B62 I 0.676
Sb06g019650 Sorghum bicolor Sb06g019650 I 0.676
Si012130m.g Setaria italica Si012130m.g I 0.676
AtMYB103 Vitis vinifera VIT_19s0015g01280 I 0.676
PRUPE_ppa021719mg Prunus persica PRUPE_ppa021719mg I 0.676
TRIUR3_35325 Triticum urartu TRIUR3_35325 I 0.676
Ca_17657 Cicer arietinum Ca_17657 I 0.676
OGLUM04G15520 Oryza glumaepatula OGLUM04G15520 I 0.676
GLYMA18G07960 Glycine max GLYMA18G07960 I 0.676
Pavir.Ga01401 Panicum virgatum Pavir.Ga01401 I 0.676
GRMZM2G173633 Zea mays GRMZM2G173633 I 0.676
MTR_3g461490 Medicago truncatula MTR_3g461490 I 0.676
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N 0.676
Gorai.009G454000 Gossypium raimondii Gorai.009G454000 I 0.676
evm.TU.supercontig_12.83 Carica papaya evm.TU.supercontig_12.83 I 0.676
BGIOSGA014912 Oryza indica BGIOSGA014912 I 0.676
F775_22620 Aegilops tauschii F775_22620 I 0.676
OB04G23000 Oryza brachyantha OB04G23000 I 0.676
OB03G42660 Oryza brachyantha OB03G42660 I 0.676
ONIVA04G13800 Oryza nivara ONIVA04G13800 I 0.676
OMERI04G13500 Oryza meridionalis OMERI04G13500 I 0.676
cassava33918.m1 Manihot esculenta cassava33918.m1 I 0.676
OPUNC04G13560 Oryza punctata OPUNC04G13560 I 0.676
Cucsa.041880 Cucumis sativus Cucsa.041880 I 0.676
ORGLA04G0126700 Oryza glaberrima ORGLA04G0126700 I 0.676
ORUFI04G17000 Oryza rufipogon ORUFI04G17000 I 0.676
PRUPE_ppa024417mg Prunus persica PRUPE_ppa024417mg I 0.675
MTR_4g097570 Medicago truncatula MTR_4g097570 I 0.675
e_gw1.284.46.1 Physcomitrella patens e_gw1.284.46.1 N 0.674
Cla021213 Citrullus lanatus Cla021213 I 0.673
Cla014272 Citrullus lanatus Cla014272 I 0.673
VIT_18s0001g08470 Vitis vinifera VIT_18s0001g08470 I 0.673
Ciclev10027178m.g Citrus clementina Ciclev10027178m.g I 0.673
Cucsa.103470 Cucumis sativus Cucsa.103470 I 0.673
cassava25562.m1 Manihot esculenta cassava25562.m1 I 0.673
cassava46793.m1 Manihot esculenta cassava46793.m1 I 0.673
MYB36 Vitis vinifera VIT_11s0052g01490 I 0.673
Sb01g006800 Sorghum bicolor Sb01g006800 I 0.673
TCM_034634 Theobroma cacao TCM_034634 I 0.673
MTR_5g014990 Medicago truncatula MTR_5g014990 I 0.673
orange1.1g036344m.g Citrus sinensis orange1.1g036344m.g I 0.673
OGLUM03G35410 Oryza glumaepatula OGLUM03G35410 I 0.673
OLONG_025560 Oryza longistaminata OLONG_025560 I 0.673
ONIVA03G37150 Oryza nivara ONIVA03G37150 I 0.673
OMERI03G32880 Oryza meridionalis OMERI03G32880 I 0.673
LPERR03G29970 Leersia perrieri LPERR03G29970 I 0.673
Pavir.Ia00427 Panicum virgatum Pavir.Ia00427 I 0.673
BRADI5G13041 Brachypodium distachyon BRADI5G13041 I 0.673
BGIOSGA009746 Oryza indica BGIOSGA009746 I 0.673
AMTR_s00044p00189590 Amborella trichopoda AMTR_s00044p00189590 I 0.673
F775_07686 Aegilops tauschii F775_07686 I 0.673
GLYMA04G05170 Glycine max GLYMA04G05170 I 0.673
SapurV1A.0004s0360 Salix purpurea SapurV1A.0004s0360 I 0.673
GLYMA11G04880 Glycine max GLYMA11G04880 I 0.673
ORGLA03G0327000 Oryza glaberrima ORGLA03G0327000 I 0.673
OBART03G35660 Oryza barthii OBART03G35660 I 0.673
Si036681m.g Setaria italica Si036681m.g I 0.673
POPTR_0018s10390 Populus trichocarpa POPTR_0018s10390 I 0.673
POPTR_0002s11440 Populus trichocarpa POPTR_0002s11440 I 0.673
ORUFI03G37090 Oryza rufipogon ORUFI03G37090 I 0.673
OS03G0771100 Oryza sativa OS03G0771100 I 0.673
Lus10001394.g Linum usitatissimum Lus10001394.g I 0.672
Pm026353 Prunus mume Pm026353 I 0.672
SapurV1A.0584s0070 Salix purpurea SapurV1A.0584s0070 I 0.672
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I 0.672
Solyc06g074910.2 Solanum lycopersicum Solyc06g074910.2 I 0.672
Lus10023002.g Linum usitatissimum Lus10023002.g I 0.672
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I 0.671
e_gw1.141.66.1 Physcomitrella patens e_gw1.141.66.1 N 0.671
Aquca_001_00247 Aquilegia coerulea Aquca_001_00247 I 0.670
Lus10005834.g Linum usitatissimum Lus10005834.g N 0.670
GLYMA01G40411 Glycine max GLYMA01G40411 I 0.670
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N 0.670
Gorai.009G006700 Gossypium raimondii Gorai.009G006700 I 0.670
AMTR_s00019p00201260 Amborella trichopoda AMTR_s00019p00201260 I 0.670
Lus10039462.g Linum usitatissimum Lus10039462.g N 0.670
gene01457-v1.0-hybrid Fragaria vesca gene01457-v1.0-hybrid I 0.669
gene02643-v1.0-hybrid Fragaria vesca gene02643-v1.0-hybrid I 0.669
mgf021409m Mimulus guttatus mgf021409m I 0.669
Eucgr.F02207 Eucalyptus grandis Eucgr.F02207 I 0.668
POPTR_0015s07900 Populus trichocarpa POPTR_0015s07900 N 0.668
Pavir.Db01456 Panicum virgatum Pavir.Db01456 I 0.667
BGIOSGA010923 Oryza indica BGIOSGA010923 I 0.667
POPTR_0011s17060 Populus trichocarpa POPTR_0011s17060 I 0.667
GRMZM2G308034 Zea mays GRMZM2G308034 I 0.667
Sb01g038250 Sorghum bicolor Sb01g038250 I 0.667
LPERR04G12420 Leersia perrieri LPERR04G12420 I 0.667
Lus10039646.g Linum usitatissimum Lus10039646.g I 0.666
Traes_5DL_1521D205A Triticum aestivum Traes_5DL_1521D205A I 0.666
Traes_5BL_A848F629F Triticum aestivum Traes_5BL_A848F629F I 0.666
Cla019436 Citrullus lanatus Cla019436 N 0.666
Traes_5AL_8008803A5 Triticum aestivum Traes_5AL_8008803A5 I 0.666
GLYMA19G36830 Glycine max GLYMA19G36830 I 0.666
F775_08680 Aegilops tauschii F775_08680 I 0.666
MLOC_52896 Hordeum vulgare MLOC_52896 I 0.666
Cla004524 Citrullus lanatus Cla004524 I 0.665
Solyc11g069030.1 Solanum lycopersicum Solyc11g069030.1 I 0.665
Ca_02249 Cicer arietinum Ca_02249 I 0.664
MTR_1g017140 Medicago truncatula MTR_1g017140 I 0.664
Ca_09203 Cicer arietinum Ca_09203 I 0.664
SapurV1A.0271s0250 Salix purpurea SapurV1A.0271s0250 I 0.664
GLYMA06G05260 Glycine max GLYMA06G05260 I 0.664
Gorai.009G222900 Gossypium raimondii Gorai.009G222900 I 0.664
SapurV1A.0818s0020 Salix purpurea SapurV1A.0818s0020 I 0.664
Cucsa.353120 Cucumis sativus Cucsa.353120 I 0.664
LjSGA_028088.1 Lotus japonicus LjSGA_028088.1 I 0.663
MTR_4g057635 Medicago truncatula MTR_4g057635 I 0.663
GLYMA12G30140 Glycine max GLYMA12G30140 I 0.663
GLYMA11G19980 Glycine max GLYMA11G19980 I 0.663
GLYMA12G08480 Glycine max GLYMA12G08480 I 0.663
Ca_17470 Cicer arietinum Ca_17470 I 0.663
orange1.1g020997m.g Citrus sinensis orange1.1g020997m.g I 0.662
PGSC0003DMG400002013 Solanum tuberosum PGSC0003DMG400002013 I 0.662
TCM_022255 Theobroma cacao TCM_022255 I 0.662
Ciclev10008921m.g Citrus clementina Ciclev10008921m.g I 0.662
cassava41279.m1 Manihot esculenta cassava41279.m1 N 0.662
Ciclev10012151m.g Citrus clementina Ciclev10012151m.g I 0.662
Eucgr.A01670 Eucalyptus grandis Eucgr.A01670 I 0.662
evm.TU.supercontig_102.29 Carica papaya evm.TU.supercontig_102.29 I 0.662
Lus10016139.g Linum usitatissimum Lus10016139.g I 0.662
Lus10021428.g Linum usitatissimum Lus10021428.g I 0.662
MDP0000245436 Malus domestica MDP0000245436 I 0.662
PRUPE_ppa008732mg Prunus persica PRUPE_ppa008732mg I 0.662
Solyc09g008250.2 Solanum lycopersicum Solyc09g008250.2 I 0.662
gene09663-v1.0-hybrid Fragaria vesca gene09663-v1.0-hybrid I 0.662
PGSC0003DMG400003890 Solanum tuberosum PGSC0003DMG400003890 I 0.662
Ca_10555 Cicer arietinum Ca_10555 N 0.661