evm.TU.supercontig_12.83 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_12.83 T287053_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB80
M07142_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHNN
NNDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MS188_col_a 		0.857 0.925
MYB80
M07143_2.00 		Arabidopsis thaliana
YYYACCTAMYTWNNN
NNNWARKTAGGTRRR		 Dap-seq
OMalley et al.(2016)
MS188_colamp_a 		0.857 0.925
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_12.83 Myb 14 61
evm.model.supercontig_12.83 Myb 67 112

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa021719mg Prunus persica PRUPE_ppa021719mg I 0.884
GLYMA18G07960 Glycine max GLYMA18G07960 I 0.884
Gorai.009G454000 Gossypium raimondii Gorai.009G454000 I 0.884
AtMYB103 Vitis vinifera VIT_19s0015g01280 I 0.884
Cucsa.041880 Cucumis sativus Cucsa.041880 I 0.884
cassava33918.m1 Manihot esculenta cassava33918.m1 I 0.884
Ca_17657 Cicer arietinum Ca_17657 I 0.884
gene01457-v1.0-hybrid Fragaria vesca gene01457-v1.0-hybrid I 0.878
POPTR_0011s17060 Populus trichocarpa POPTR_0011s17060 I 0.875
Cla004524 Citrullus lanatus Cla004524 I 0.874
Bra035604 Brassica rapa Bra035604 I 0.874
Ciclev10008921m.g Citrus clementina Ciclev10008921m.g I 0.871
MTR_3g461490 Medicago truncatula MTR_3g461490 I 0.869
TCM_030529 Theobroma cacao TCM_030529 I 0.867
SapurV1A.0338s0180 Salix purpurea SapurV1A.0338s0180 I 0.867
Bostr.26833s0652 Boechera stricta Bostr.26833s0652 I 0.866
POPTR_0001s47430 Populus trichocarpa POPTR_0001s47430 I 0.865
TRIUR3_35325 Triticum urartu TRIUR3_35325 I 0.863
ONIVA04G13800 Oryza nivara ONIVA04G13800 I 0.863
OGLUM04G15520 Oryza glumaepatula OGLUM04G15520 I 0.863
OPUNC04G13560 Oryza punctata OPUNC04G13560 I 0.863
OB04G23000 Oryza brachyantha OB04G23000 I 0.863
Traes_2BL_361925B62 Triticum aestivum Traes_2BL_361925B62 I 0.863
Pavir.Ga01401 Panicum virgatum Pavir.Ga01401 I 0.863
Si012130m.g Setaria italica Si012130m.g I 0.863
Sb06g019650 Sorghum bicolor Sb06g019650 I 0.863
ORUFI04G17000 Oryza rufipogon ORUFI04G17000 I 0.863
ORGLA04G0126700 Oryza glaberrima ORGLA04G0126700 I 0.863
OMERI04G13500 Oryza meridionalis OMERI04G13500 I 0.863
GRMZM2G173633 Zea mays GRMZM2G173633 I 0.863
F775_22620 Aegilops tauschii F775_22620 I 0.863
BGIOSGA014912 Oryza indica BGIOSGA014912 I 0.863
MYB80 Arabidopsis thaliana AT5G56110 D 0.857
Carubv10027619m.g Capsella rubella Carubv10027619m.g I 0.857
Al_scaffold_0008_2049 Arabidopsis lyrata Al_scaffold_0008_2049 I 0.857
Bra002847 Brassica rapa Bra002847 I 0.857
Thhalv10015622m.g Eutrema salsugineum Thhalv10015622m.g I 0.857
Cagra.3745s0008 Capsella grandiflora Cagra.3745s0008 I 0.857
Bo2g036530 Brassica oleracea Bo2g036530 I 0.854
LPERR04G12420 Leersia perrieri LPERR04G12420 I 0.854
AtMYB103 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001268 I 0.853
Aquca_005_00315 Aquilegia coerulea Aquca_005_00315 I 0.852
Solyc10g005760.1 Solanum lycopersicum Solyc10g005760.1 I 0.849
PGSC0003DMG400008687 Solanum tuberosum PGSC0003DMG400008687 I 0.849
SapurV1A.0395s0050 Salix purpurea SapurV1A.0395s0050 I 0.848
Bo9g123440 Brassica oleracea Bo9g123440 I 0.846
Eucgr.F03656 Eucalyptus grandis Eucgr.F03656 I 0.844
BGIOSGA030830 Oryza indica BGIOSGA030830 I 0.843
BRADI5G13041 Brachypodium distachyon BRADI5G13041 I 0.842
Traes_2DL_A03AB7608 Triticum aestivum Traes_2DL_A03AB7608 I 0.818
Pavir.J28142 Panicum virgatum Pavir.J28142 I 0.748
Solyc02g091980.1 Solanum lycopersicum Solyc02g091980.1 I 0.704
PGSC0003DMG400021401 Solanum tuberosum PGSC0003DMG400021401 I 0.704
Lus10013830.g Linum usitatissimum Lus10013830.g I 0.701
Lus10026543.g Linum usitatissimum Lus10026543.g I 0.701
Gorai.006G162800 Gossypium raimondii Gorai.006G162800 I 0.697
MTR_4g097570 Medicago truncatula MTR_4g097570 I 0.694
Lus10011606.g Linum usitatissimum Lus10011606.g I 0.693
GRMZM2G104789 Zea mays GRMZM2G104789 I 0.693
GLYMA19G36830 Glycine max GLYMA19G36830 I 0.691
PGSC0003DMG400004948 Solanum tuberosum PGSC0003DMG400004948 I 0.690
Solyc04g077260.2 Solanum lycopersicum Solyc04g077260.2 I 0.690
GSMUA_Achr6G31740_001 Musa acuminata GSMUA_Achr6G31740_001 I 0.690
MDP0000786507 Malus domestica MDP0000786507 I 0.686
MDP0000124992 Malus domestica MDP0000124992 I 0.686
PRUPE_ppa024417mg Prunus persica PRUPE_ppa024417mg I 0.686
MDP0000262514 Malus domestica MDP0000262514 I 0.686
GSMUA_Achr5G01930_001 Musa acuminata GSMUA_Achr5G01930_001 I 0.685
GLYMA03G34110 Glycine max GLYMA03G34110 I 0.683
GLYMA11G19980 Glycine max GLYMA11G19980 I 0.682
Lus10001394.g Linum usitatissimum Lus10001394.g I 0.682
Pm026353 Prunus mume Pm026353 I 0.682
MTR_4g057635 Medicago truncatula MTR_4g057635 I 0.682
GLYMA12G08480 Glycine max GLYMA12G08480 I 0.682
Ca_17470 Cicer arietinum Ca_17470 I 0.682
Lus10023002.g Linum usitatissimum Lus10023002.g I 0.682
LjSGA_028088.1 Lotus japonicus LjSGA_028088.1 I 0.682
GLYMA12G30140 Glycine max GLYMA12G30140 I 0.682
GLYMA01G40411 Glycine max GLYMA01G40411 I 0.679
Gorai.009G006700 Gossypium raimondii Gorai.009G006700 I 0.679
MDP0000701148 Malus domestica MDP0000701148 N 0.679
OB03G42660 Oryza brachyantha OB03G42660 I 0.679
MDP0000420216 Malus domestica MDP0000420216 N 0.679
GLYMA13G39760 Glycine max GLYMA13G39760 I 0.678
GSMUA_Achr10G08350_001 Musa acuminata GSMUA_Achr10G08350_001 I 0.677
Gorai.009G222900 Gossypium raimondii Gorai.009G222900 I 0.676
cassava46793.m1 Manihot esculenta cassava46793.m1 I 0.676
cassava25562.m1 Manihot esculenta cassava25562.m1 I 0.676
Pavir.Ia00427 Panicum virgatum Pavir.Ia00427 I 0.676
gw1.65.181.1 Physcomitrella patens gw1.65.181.1 N 0.676
SapurV1A.0004s0360 Salix purpurea SapurV1A.0004s0360 I 0.676
Cla021213 Citrullus lanatus Cla021213 I 0.676
SapurV1A.0271s0250 Salix purpurea SapurV1A.0271s0250 I 0.676
Ciclev10027178m.g Citrus clementina Ciclev10027178m.g I 0.676
estExt_Genewise1.C_360117 Physcomitrella patens estExt_Genewise1.C_360117 N 0.676
Cucsa.103470 Cucumis sativus Cucsa.103470 I 0.676
Cucsa.353120 Cucumis sativus Cucsa.353120 I 0.676
orange1.1g036344m.g Citrus sinensis orange1.1g036344m.g I 0.676
TCM_034634 Theobroma cacao TCM_034634 I 0.676
MTR_5g014990 Medicago truncatula MTR_5g014990 I 0.676
Si036681m.g Setaria italica Si036681m.g I 0.676
ORUFI03G37090 Oryza rufipogon ORUFI03G37090 I 0.676
ONIVA03G37150 Oryza nivara ONIVA03G37150 I 0.676
MTR_1g017140 Medicago truncatula MTR_1g017140 I 0.676
OBART03G35660 Oryza barthii OBART03G35660 I 0.676
POPTR_0018s10390 Populus trichocarpa POPTR_0018s10390 I 0.676
OMERI03G32880 Oryza meridionalis OMERI03G32880 I 0.676
OLONG_025560 Oryza longistaminata OLONG_025560 I 0.676
OGLUM03G35410 Oryza glumaepatula OGLUM03G35410 I 0.676
Sb01g006800 Sorghum bicolor Sb01g006800 I 0.676
POPTR_0002s11440 Populus trichocarpa POPTR_0002s11440 I 0.676
ORGLA03G0327000 Oryza glaberrima ORGLA03G0327000 I 0.676
GLYMA04G05170 Glycine max GLYMA04G05170 I 0.676
Ca_09203 Cicer arietinum Ca_09203 I 0.676
BGIOSGA009746 Oryza indica BGIOSGA009746 I 0.676
OS03G0771100 Oryza sativa OS03G0771100 I 0.676
GLYMA06G05260 Glycine max GLYMA06G05260 I 0.676
GLYMA11G04880 Glycine max GLYMA11G04880 I 0.676
VIT_18s0001g08470 Vitis vinifera VIT_18s0001g08470 I 0.676
LPERR03G29970 Leersia perrieri LPERR03G29970 I 0.676
Cla014272 Citrullus lanatus Cla014272 I 0.676
Ca_02249 Cicer arietinum Ca_02249 I 0.676
MYB36 Vitis vinifera VIT_11s0052g01490 I 0.676
Lus10016139.g Linum usitatissimum Lus10016139.g I 0.671
Lus10021428.g Linum usitatissimum Lus10021428.g I 0.671
MTR_2g095520 Medicago truncatula MTR_2g095520 I 0.671
GRMZM2G090837 Zea mays GRMZM2G090837 I 0.671
AMTR_s00076p00157170 Amborella trichopoda AMTR_s00076p00157170 I 0.671
Pavir.Bb01783 Panicum virgatum Pavir.Bb01783 I 0.671
Pavir.Ba03178 Panicum virgatum Pavir.Ba03178 I 0.671
MDP0000245436 Malus domestica MDP0000245436 I 0.671
orange1.1g020997m.g Citrus sinensis orange1.1g020997m.g I 0.671
MDP0000229498 Malus domestica MDP0000229498 I 0.671
PGSC0003DMG400002013 Solanum tuberosum PGSC0003DMG400002013 I 0.671
cassava34548.m1 Manihot esculenta cassava34548.m1 I 0.671
cassava26711.m1 Manihot esculenta cassava26711.m1 I 0.671
Si030544m.g Setaria italica Si030544m.g I 0.671
Gorai.013G269300 Gossypium raimondii Gorai.013G269300 I 0.671
Aquca_062_00019 Aquilegia coerulea Aquca_062_00019 I 0.671
TCM_042012 Theobroma cacao TCM_042012 I 0.671
Solyc09g008250.2 Solanum lycopersicum Solyc09g008250.2 I 0.671
Sb02g012860 Sorghum bicolor Sb02g012860 I 0.671
Ciclev10012151m.g Citrus clementina Ciclev10012151m.g I 0.671
Pm001105 Prunus mume Pm001105 I 0.671
gene09663-v1.0-hybrid Fragaria vesca gene09663-v1.0-hybrid I 0.671
PGSC0003DMG400003890 Solanum tuberosum PGSC0003DMG400003890 I 0.671
cassava27131.m1 Manihot esculenta cassava27131.m1 I 0.671
evm.TU.supercontig_102.29 Carica papaya evm.TU.supercontig_102.29 I 0.671
PRUPE_ppa008732mg Prunus persica PRUPE_ppa008732mg I 0.671
cassava28503.m1 Manihot esculenta cassava28503.m1 I 0.671
PRUPE_ppa007823mg Prunus persica PRUPE_ppa007823mg I 0.671
Traes_5DL_1521D205A Triticum aestivum Traes_5DL_1521D205A I 0.668
MLOC_52896 Hordeum vulgare MLOC_52896 I 0.668
F775_08680 Aegilops tauschii F775_08680 I 0.668
Lus10039646.g Linum usitatissimum Lus10039646.g I 0.668
Traes_5BL_A848F629F Triticum aestivum Traes_5BL_A848F629F I 0.668
Traes_5AL_8008803A5 Triticum aestivum Traes_5AL_8008803A5 I 0.668
evm.TU.supercontig_160.24 Carica papaya evm.TU.supercontig_160.24 I 0.667
SapurV1A.0818s0020 Salix purpurea SapurV1A.0818s0020 I 0.667
MDP0000587648 Malus domestica MDP0000587648 I 0.666
OB08G17260 Oryza brachyantha OB08G17260 I 0.665
Aquca_068_00041 Aquilegia coerulea Aquca_068_00041 I 0.663
evm.TU.supercontig_65.37 Carica papaya evm.TU.supercontig_65.37 I 0.662
Ca_09368 Cicer arietinum Ca_09368 I 0.661