Bostr.3288s0058 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.3288s0058 T285861_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB51
M07010_2.00 		Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW
WRGTWGGTRRRNNNDNDDNDN		 Dap-seq
OMalley et al.(2016)
MYB51_col_a 		0.706 0.796
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.3288s0058.1.p Myb 14 61
Bostr.3288s0058.1.p Myb 67 112

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10020723m.g Capsella rubella Carubv10020723m.g I 0.817
MYB122 Arabidopsis thaliana AT1G74080 I 0.772
Bra015939 Brassica rapa Bra015939 I 0.761
Bo6g118350 Brassica oleracea Bo6g118350 I 0.761
ATMYB122 Arabidopsis lyrata fgenesh2_kg.2__1680__AT1G74080.1 I 0.746
Bra008131 Brassica rapa Bra008131 I 0.736
Bo2g080900 Brassica oleracea Bo2g080900 I 0.729
Thhalv10018705m.g Eutrema salsugineum Thhalv10018705m.g I 0.724
Bo8g067910 Brassica oleracea Bo8g067910 I 0.712
Bra031035 Brassica rapa Bra031035 I 0.710
Bo8g104300 Brassica oleracea Bo8g104300 I 0.710
Thhalv10008152m.g Eutrema salsugineum Thhalv10008152m.g I 0.709
MYB51 Arabidopsis lyrata fgenesh2_kg.1__2031__AT1G18570.1 I 0.706
Bostr.7128s0464 Boechera stricta Bostr.7128s0464 I 0.706
Carubv10009563m.g Capsella rubella Carubv10009563m.g I 0.706
MYB51 Arabidopsis thaliana AT1G18570 D 0.706
Cagra.4153s0023 Capsella grandiflora Cagra.4153s0023 I 0.706
Bra016553 Brassica rapa Bra016553 I 0.682
Bra025666 Brassica rapa Bra025666 I 0.679
Bo5g025570 Brassica oleracea Bo5g025570 I 0.679
evm.TU.supercontig_3.239 Carica papaya evm.TU.supercontig_3.239 I 0.669
POPTR_0002s09720 Populus trichocarpa POPTR_0002s09720 I 0.664
Cla014359 Citrullus lanatus Cla014359 I 0.663
GSMUA_Achr9G12180_001 Musa acuminata GSMUA_Achr9G12180_001 I 0.662