Bo2g080900 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo2g080900 T267159_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB51
M07010_2.00 		Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW
WRGTWGGTRRRNNNDNDDNDN		 Dap-seq
OMalley et al.(2016)
MYB51_col_a 		0.779 0.817
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g080900.1 Myb 62 109
Bo2g080900.1 Myb 115 160

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra008131 Brassica rapa Bra008131 I 0.864
Bo6g118350 Brassica oleracea Bo6g118350 I 0.847
Bra015939 Brassica rapa Bra015939 I 0.847
MYB122 Arabidopsis thaliana AT1G74080 I 0.828
Thhalv10018705m.g Eutrema salsugineum Thhalv10018705m.g I 0.827
ATMYB122 Arabidopsis lyrata fgenesh2_kg.2__1680__AT1G74080.1 I 0.802
Bra016553 Brassica rapa Bra016553 I 0.785
Bo8g067910 Brassica oleracea Bo8g067910 I 0.785
Bo8g104300 Brassica oleracea Bo8g104300 I 0.783
Bra031035 Brassica rapa Bra031035 I 0.783
Bo5g025570 Brassica oleracea Bo5g025570 I 0.782
Thhalv10008152m.g Eutrema salsugineum Thhalv10008152m.g I 0.782
Bra025666 Brassica rapa Bra025666 I 0.782
Bostr.7128s0464 Boechera stricta Bostr.7128s0464 I 0.779
MYB51 Arabidopsis lyrata fgenesh2_kg.1__2031__AT1G18570.1 I 0.779
MYB51 Arabidopsis thaliana AT1G18570 D 0.779
Cagra.4153s0023 Capsella grandiflora Cagra.4153s0023 I 0.762
Carubv10009563m.g Capsella rubella Carubv10009563m.g I 0.762
evm.TU.supercontig_3.239 Carica papaya evm.TU.supercontig_3.239 I 0.761
Carubv10020723m.g Capsella rubella Carubv10020723m.g I 0.761
Thhalv10004638m.g Eutrema salsugineum Thhalv10004638m.g I 0.736
MYB34 Arabidopsis thaliana AT5G60890 I 0.736
Carubv10027524m.g Capsella rubella Carubv10027524m.g I 0.736
ATMYB34 Arabidopsis lyrata fgenesh2_kg.8__2056__AT5G60890.1 I 0.736
Bra013000 Brassica rapa Bra013000 I 0.736
Bo7g098110 Brassica oleracea Bo7g098110 I 0.733
Bostr.3288s0058 Boechera stricta Bostr.3288s0058 I 0.729
Cagra.2925s0017 Capsella grandiflora Cagra.2925s0017 I 0.725
MYB29 Arabidopsis thaliana AT5G07690 I 0.725
Thhalv10013952m.g Eutrema salsugineum Thhalv10013952m.g I 0.725
cassava44039.valid.m1 Manihot esculenta cassava44039.valid.m1 I 0.725
Bostr.13129s0197 Boechera stricta Bostr.13129s0197 I 0.725
Carubv10001328m.g Capsella rubella Carubv10001328m.g I 0.725
Bra005949 Brassica rapa Bra005949 I 0.721
cassava47112.m1 Manihot esculenta cassava47112.m1 I 0.717
cassava46146.m1 Manihot esculenta cassava46146.m1 I 0.717
Bo2g161180 Brassica oleracea Bo2g161180 I 0.716
Bra029349 Brassica rapa Bra029349 I 0.716
Bo9g175680 Brassica oleracea Bo9g175680 I 0.715
Lus10019085.g Linum usitatissimum Lus10019085.g I 0.714
Carubv10027861m.g Capsella rubella Carubv10027861m.g I 0.714
Thhalv10004407m.g Eutrema salsugineum Thhalv10004407m.g I 0.714
MYB28 Arabidopsis lyrata scaffold_802785.1 I 0.714
Bostr.26833s0098 Boechera stricta Bostr.26833s0098 I 0.714
MYB28 Arabidopsis thaliana AT5G61420 I 0.714
Bo2g161590 Brassica oleracea Bo2g161590 I 0.714
Bo9g014610 Brassica oleracea Bo9g014610 I 0.714
Bra035929 Brassica rapa Bra035929 I 0.714
Cagra.0542s0036 Capsella grandiflora Cagra.0542s0036 I 0.714
Bra029350 Brassica rapa Bra029350 I 0.711
MYB29 Arabidopsis lyrata fgenesh2_kg.6__738__AT5G07690.1 I 0.710
Bra035954 Brassica rapa Bra035954 I 0.706
Bostr.26833s0149 Boechera stricta Bostr.26833s0149 I 0.706
Bo9g014380 Brassica oleracea Bo9g014380 I 0.706
MYB76 Arabidopsis lyrata Al_scaffold_0006_698 I 0.703
MYB76 Arabidopsis thaliana AT5G07700 I 0.703
Bo7g098590 Brassica oleracea Bo7g098590 I 0.703
Bra012961 Brassica rapa Bra012961 I 0.703
PK27708.1 Cannabis sativa PK27708.1 I 0.702
Bo3g004500 Brassica oleracea Bo3g004500 I 0.702
MTR_3g097450 Medicago truncatula MTR_3g097450 I 0.694
Bo2g161170 Brassica oleracea Bo2g161170 I 0.693
Si012585m.g Setaria italica Si012585m.g I 0.691
Pavir.Ca00232 Panicum virgatum Pavir.Ca00232 I 0.691
Pavir.Ca00231 Panicum virgatum Pavir.Ca00231 I 0.691
Si011098m.g Setaria italica Si011098m.g I 0.691
Si012017m.g Setaria italica Si012017m.g I 0.691
PK14811.1 Cannabis sativa PK14811.1 I 0.690
Bra029311 Brassica rapa Bra029311 I 0.689
PK01174.1 Cannabis sativa PK01174.1 I 0.689
PK21058.1 Cannabis sativa PK21058.1 I 0.685
Eucgr.F02583 Eucalyptus grandis Eucgr.F02583 I 0.685
Gorai.009G288900 Gossypium raimondii Gorai.009G288900 I 0.685
28154.m000040 Ricinus communis 28154.m000040 I 0.685
GLYMA04G38240 Glycine max GLYMA04G38240 I 0.685
GLYMA06G16820 Glycine max GLYMA06G16820 I 0.685
cassava1644.valid.m1 Manihot esculenta cassava1644.valid.m1 I 0.685
cassava4975.m1 Manihot esculenta cassava4975.m1 I 0.685
Cucsa.061660 Cucumis sativus Cucsa.061660 I 0.685
POPTR_0013s14480 Populus trichocarpa POPTR_0013s14480 I 0.683
LjSGA_007368.1 Lotus japonicus LjSGA_007368.1 I 0.682
mgf025197m Mimulus guttatus mgf025197m I 0.681
Eucgr.G01774 Eucalyptus grandis Eucgr.G01774 I 0.679
GSMUA_Achr9G08600_001 Musa acuminata GSMUA_Achr9G08600_001 I 0.679
GSMUA_Achr6G25420_001 Musa acuminata GSMUA_Achr6G25420_001 I 0.679
GSMUA_Achr6G07260_001 Musa acuminata GSMUA_Achr6G07260_001 I 0.679
Gorai.005G162600 Gossypium raimondii Gorai.005G162600 I 0.677
GSMUA_AchrUn_randomG28780_001 Musa acuminata GSMUA_AchrUn_randomG28780_001 I 0.676
POPTR_0015s04300 Populus trichocarpa POPTR_0015s04300 I 0.675
SapurV1A.1807s0010 Salix purpurea SapurV1A.1807s0010 I 0.675
cassava46145.m1 Manihot esculenta cassava46145.m1 I 0.673
Gorai.003G097900 Gossypium raimondii Gorai.003G097900 I 0.672
Ciclev10017668m.g Citrus clementina Ciclev10017668m.g I 0.671
GSMUA_Achr10G16010_001 Musa acuminata GSMUA_Achr10G16010_001 I 0.671
cassava39892.m1 Manihot esculenta cassava39892.m1 I 0.671
orange1.1g035629m.g Citrus sinensis orange1.1g035629m.g I 0.671
Aquca_073_00013 Aquilegia coerulea Aquca_073_00013 I 0.668
MDP0000209761 Malus domestica MDP0000209761 I 0.668
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I 0.667
Sb08g004720 Sorghum bicolor Sb08g004720 I 0.665
TCM_014091 Theobroma cacao TCM_014091 I 0.664
MDP0000872821 Malus domestica MDP0000872821 I 0.664
Lus10028435.g Linum usitatissimum Lus10028435.g I 0.663
Lus10041888.g Linum usitatissimum Lus10041888.g I 0.663
GSMUA_Achr2G20600_001 Musa acuminata GSMUA_Achr2G20600_001 I 0.662
Lus10020085.g Linum usitatissimum Lus10020085.g I 0.662
Lus10006740.g Linum usitatissimum Lus10006740.g I 0.662
cassava2558.valid.m1 Manihot esculenta cassava2558.valid.m1 I 0.662
MYB32 Arabidopsis thaliana AT4G34990 I 0.661
Bra017685 Brassica rapa Bra017685 I 0.661
Thhalv10025926m.g Eutrema salsugineum Thhalv10025926m.g I 0.661
Bo7g117140 Brassica oleracea Bo7g117140 I 0.661
Lus10009448.g Linum usitatissimum Lus10009448.g I 0.661
Carubv10005438m.g Capsella rubella Carubv10005438m.g I 0.661
Cagra.2350s0045 Capsella grandiflora Cagra.2350s0045 I 0.661
Bostr.7867s1358 Boechera stricta Bostr.7867s1358 I 0.661
TCM_012631 Theobroma cacao TCM_012631 I 0.661
AtMYB32 Arabidopsis lyrata scaffold_700628.1 I 0.661
Pavir.J00444 Panicum virgatum Pavir.J00444 I 0.661
Pavir.J00442 Panicum virgatum Pavir.J00442 I 0.661
GSMUA_Achr1G02420_001 Musa acuminata GSMUA_Achr1G02420_001 I 0.661