Bo9g014380 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo9g014380 T267604_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB51
M07010_2.00 		Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW
WRGTWGGTRRRNNNDNDDNDN		 Dap-seq
OMalley et al.(2016)
MYB51_col_a 		0.791 0.817
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g014380.1 Myb 14 61
Bo9g014380.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra035954 Brassica rapa Bra035954 I 0.883
MYB34 Arabidopsis thaliana AT5G60890 I 0.842
Thhalv10004638m.g Eutrema salsugineum Thhalv10004638m.g I 0.842
ATMYB34 Arabidopsis lyrata fgenesh2_kg.8__2056__AT5G60890.1 I 0.842
Bra013000 Brassica rapa Bra013000 I 0.842
Bo7g098110 Brassica oleracea Bo7g098110 I 0.839
Carubv10027524m.g Capsella rubella Carubv10027524m.g I 0.838
Bostr.26833s0149 Boechera stricta Bostr.26833s0149 I 0.838
Bo2g161180 Brassica oleracea Bo2g161180 I 0.818
Bra029350 Brassica rapa Bra029350 I 0.807
Bo8g104300 Brassica oleracea Bo8g104300 I 0.798
Bra031035 Brassica rapa Bra031035 I 0.798
Bo8g067910 Brassica oleracea Bo8g067910 I 0.796
Bra029349 Brassica rapa Bra029349 I 0.794
Thhalv10008152m.g Eutrema salsugineum Thhalv10008152m.g I 0.794
MYB51 Arabidopsis thaliana AT1G18570 D 0.791
Carubv10009563m.g Capsella rubella Carubv10009563m.g I 0.791
Bostr.7128s0464 Boechera stricta Bostr.7128s0464 I 0.791
MYB51 Arabidopsis lyrata fgenesh2_kg.1__2031__AT1G18570.1 I 0.791
Cagra.4153s0023 Capsella grandiflora Cagra.4153s0023 I 0.791
Bo2g161170 Brassica oleracea Bo2g161170 I 0.789
Bra016553 Brassica rapa Bra016553 I 0.766
Bra025666 Brassica rapa Bra025666 I 0.764
Bo5g025570 Brassica oleracea Bo5g025570 I 0.764
ATMYB122 Arabidopsis lyrata fgenesh2_kg.2__1680__AT1G74080.1 I 0.745
Thhalv10018705m.g Eutrema salsugineum Thhalv10018705m.g I 0.740
MYB122 Arabidopsis thaliana AT1G74080 I 0.740
cassava44039.valid.m1 Manihot esculenta cassava44039.valid.m1 I 0.740
PK14811.1 Cannabis sativa PK14811.1 I 0.733
cassava47112.m1 Manihot esculenta cassava47112.m1 I 0.732
PK27708.1 Cannabis sativa PK27708.1 I 0.732
Bra015939 Brassica rapa Bra015939 I 0.720
Bo6g118350 Brassica oleracea Bo6g118350 I 0.720
Cagra.2925s0017 Capsella grandiflora Cagra.2925s0017 I 0.719
Carubv10001328m.g Capsella rubella Carubv10001328m.g I 0.719
MYB29 Arabidopsis thaliana AT5G07690 I 0.719
Thhalv10013952m.g Eutrema salsugineum Thhalv10013952m.g I 0.719
Bostr.13129s0197 Boechera stricta Bostr.13129s0197 I 0.719
evm.TU.supercontig_3.239 Carica papaya evm.TU.supercontig_3.239 I 0.716
cassava46146.m1 Manihot esculenta cassava46146.m1 I 0.715
Bra005949 Brassica rapa Bra005949 I 0.712
Lus10019085.g Linum usitatissimum Lus10019085.g I 0.712
Bo9g175680 Brassica oleracea Bo9g175680 I 0.709
Thhalv10004407m.g Eutrema salsugineum Thhalv10004407m.g I 0.708
Cagra.0542s0036 Capsella grandiflora Cagra.0542s0036 I 0.708
Bostr.26833s0098 Boechera stricta Bostr.26833s0098 I 0.708
MYB28 Arabidopsis thaliana AT5G61420 I 0.708
MYB28 Arabidopsis lyrata scaffold_802785.1 I 0.708
Carubv10027861m.g Capsella rubella Carubv10027861m.g I 0.708
Bo9g014610 Brassica oleracea Bo9g014610 I 0.708
Bo3g004500 Brassica oleracea Bo3g004500 I 0.708
Bra035929 Brassica rapa Bra035929 I 0.708
Bo2g161590 Brassica oleracea Bo2g161590 I 0.708
Gorai.003G097900 Gossypium raimondii Gorai.003G097900 I 0.707
Bo2g080900 Brassica oleracea Bo2g080900 I 0.706
PK01174.1 Cannabis sativa PK01174.1 I 0.705
MYB29 Arabidopsis lyrata fgenesh2_kg.6__738__AT5G07690.1 I 0.704
TCM_014091 Theobroma cacao TCM_014091 I 0.704
MYB76 Arabidopsis thaliana AT5G07700 I 0.702
MYB76 Arabidopsis lyrata Al_scaffold_0006_698 I 0.702
Bra012961 Brassica rapa Bra012961 I 0.698
Bo7g098590 Brassica oleracea Bo7g098590 I 0.698
Bra008131 Brassica rapa Bra008131 I 0.695
Carubv10020723m.g Capsella rubella Carubv10020723m.g I 0.694
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I 0.694
cassava46145.m1 Manihot esculenta cassava46145.m1 I 0.688
AMTR_s00024p00250970 Amborella trichopoda AMTR_s00024p00250970 I 0.687
Lus10041888.g Linum usitatissimum Lus10041888.g I 0.686
Lus10028435.g Linum usitatissimum Lus10028435.g I 0.686
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.686
Bra029311 Brassica rapa Bra029311 I 0.684
evm.TU.supercontig_28.71 Carica papaya evm.TU.supercontig_28.71 I 0.680
PGSC0003DMG400024299 Solanum tuberosum PGSC0003DMG400024299 I 0.678
Solyc01g010910.1 Solanum lycopersicum Solyc01g010910.1 I 0.678
Bo7g117140 Brassica oleracea Bo7g117140 I 0.678
Bra017685 Brassica rapa Bra017685 I 0.678
Bo1g157620 Brassica oleracea Bo1g157620 I 0.677
Thhalv10021048m.g Eutrema salsugineum Thhalv10021048m.g I 0.677
Bra021483 Brassica rapa Bra021483 I 0.677
GSMUA_Achr11G07180_001 Musa acuminata GSMUA_Achr11G07180_001 I 0.675
PK26207.1 Cannabis sativa PK26207.1 I 0.673
MTR_6g012690 Medicago truncatula MTR_6g012690 I 0.673
Pm019588 Prunus mume Pm019588 I 0.672
PRUPE_ppa017039mg Prunus persica PRUPE_ppa017039mg I 0.672
Eucgr.C03554 Eucalyptus grandis Eucgr.C03554 I 0.672
Cagra.2350s0045 Capsella grandiflora Cagra.2350s0045 I 0.669
AtMYB32 Arabidopsis lyrata scaffold_700628.1 I 0.669
Thhalv10025926m.g Eutrema salsugineum Thhalv10025926m.g I 0.669
Carubv10005438m.g Capsella rubella Carubv10005438m.g I 0.669
MYB32 Arabidopsis thaliana AT4G34990 I 0.669
Bostr.7867s1358 Boechera stricta Bostr.7867s1358 I 0.669
MDP0000574942 Malus domestica MDP0000574942 I 0.668
GSMUA_Achr6G02550_001 Musa acuminata GSMUA_Achr6G02550_001 I 0.668
GSMUA_Achr7G18410_001 Musa acuminata GSMUA_Achr7G18410_001 I 0.668
GSMUA_Achr5G23240_001 Musa acuminata GSMUA_Achr5G23240_001 I 0.668
Bo1g006820 Brassica oleracea Bo1g006820 I 0.666
Bra011576 Brassica rapa Bra011576 I 0.666
Eucgr.B00865 Eucalyptus grandis Eucgr.B00865 I 0.666
GSMUA_Achr9G08600_001 Musa acuminata GSMUA_Achr9G08600_001 I 0.665
GSMUA_Achr6G07260_001 Musa acuminata GSMUA_Achr6G07260_001 I 0.665
GSMUA_Achr10G16010_001 Musa acuminata GSMUA_Achr10G16010_001 I 0.665
GSMUA_Achr6G25420_001 Musa acuminata GSMUA_Achr6G25420_001 I 0.665
POPTR_0004s08650 Populus trichocarpa POPTR_0004s08650 I 0.664
orange1.1g036215m.g Citrus sinensis orange1.1g036215m.g I 0.663
Eucgr.I00012 Eucalyptus grandis Eucgr.I00012 I 0.661