Pavir.J02275 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J02275 T289313_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J02275.1.p Myb 18 64
Pavir.J02275.1.p Myb 114 159

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ea03744 Panicum virgatum Pavir.Ea03744 N 0.849
GRMZM2G143640 Zea mays GRMZM2G143640 N 0.827
Sb03g040730 Sorghum bicolor Sb03g040730 N 0.819
GRMZM2G027914 Zea mays GRMZM2G027914 N 0.789
Si003047m.g Setaria italica Si003047m.g N 0.780
BRADI2G55797 Brachypodium distachyon BRADI2G55797 N 0.765
OPUNC05G16000 Oryza punctata OPUNC05G16000 N 0.733
Si023363m.g Setaria italica Si023363m.g N 0.730
GRMZM2G091201 Zea mays GRMZM2G091201 N 0.726
OPUNC01G36990 Oryza punctata OPUNC01G36990 N 0.725
BGIOSGA004852 Oryza indica BGIOSGA004852 N 0.725
ORGLA01G0320500 Oryza glaberrima ORGLA01G0320500 N 0.725
OS01G0863300 Oryza sativa OS01G0863300 N 0.725
ORUFI01G41590 Oryza rufipogon ORUFI01G41590 N 0.725
OMERI01G35110 Oryza meridionalis OMERI01G35110 N 0.725
ONIVA01G42920 Oryza nivara ONIVA01G42920 N 0.725
OBART01G38220 Oryza barthii OBART01G38220 N 0.725
OGLUM01G42400 Oryza glumaepatula OGLUM01G42400 N 0.725
OGLUM05G19240 Oryza glumaepatula OGLUM05G19240 N 0.724
OS05G0442400 Oryza sativa OS05G0442400 N 0.724
BGIOSGA017964 Oryza indica BGIOSGA017964 N 0.724
ORUFI05G19330 Oryza rufipogon ORUFI05G19330 N 0.724
BGIOSGA017965 Oryza indica BGIOSGA017965 N 0.724
ORUFI05G19340 Oryza rufipogon ORUFI05G19340 N 0.724
ONIVA05G19090 Oryza nivara ONIVA05G19090 N 0.724
OGLUM05G19230 Oryza glumaepatula OGLUM05G19230 N 0.724
ORGLA05G0157700 Oryza glaberrima ORGLA05G0157700 N 0.724
Pavir.J08778 Panicum virgatum Pavir.J08778 N 0.721
LPERR05G14380 Leersia perrieri LPERR05G14380 N 0.717
LPERR01G32800 Leersia perrieri LPERR01G32800 N 0.703
Sb09g021770 Sorghum bicolor Sb09g021770 N 0.701
TRAES3BF019300020CFD_g Triticum aestivum TRAES3BF019300020CFD_g N 0.700
F775_31610 Aegilops tauschii F775_31610 N 0.693
GSMUA_Achr11G09110_001 Musa acuminata GSMUA_Achr11G09110_001 N 0.676