Pavir.J08778 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J08778 T289348_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J08778.1.p Myb 23 72
Pavir.J08778.1.p Myb 113 160

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si023363m.g Setaria italica Si023363m.g N 0.893
ORGLA05G0157700 Oryza glaberrima ORGLA05G0157700 N 0.824
GRMZM2G091201 Zea mays GRMZM2G091201 N 0.804
OS05G0442400 Oryza sativa OS05G0442400 N 0.794
OGLUM05G19240 Oryza glumaepatula OGLUM05G19240 N 0.794
OPUNC05G16000 Oryza punctata OPUNC05G16000 N 0.794
ORUFI05G19340 Oryza rufipogon ORUFI05G19340 N 0.794
BGIOSGA017964 Oryza indica BGIOSGA017964 N 0.794
LPERR05G14380 Leersia perrieri LPERR05G14380 N 0.787
BGIOSGA017965 Oryza indica BGIOSGA017965 N 0.783
OGLUM05G19230 Oryza glumaepatula OGLUM05G19230 N 0.783
ORUFI05G19330 Oryza rufipogon ORUFI05G19330 N 0.783
ONIVA05G19090 Oryza nivara ONIVA05G19090 N 0.783
Sb09g021770 Sorghum bicolor Sb09g021770 N 0.780
BRADI2G55797 Brachypodium distachyon BRADI2G55797 N 0.730
ORGLA01G0320500 Oryza glaberrima ORGLA01G0320500 N 0.723
ORUFI01G41590 Oryza rufipogon ORUFI01G41590 N 0.723
OS01G0863300 Oryza sativa OS01G0863300 N 0.723
OPUNC01G36990 Oryza punctata OPUNC01G36990 N 0.723
ONIVA01G42920 Oryza nivara ONIVA01G42920 N 0.723
BGIOSGA004852 Oryza indica BGIOSGA004852 N 0.723
OGLUM01G42400 Oryza glumaepatula OGLUM01G42400 N 0.723
OBART01G38220 Oryza barthii OBART01G38220 N 0.723
OMERI01G35110 Oryza meridionalis OMERI01G35110 N 0.723
Pavir.J02275 Panicum virgatum Pavir.J02275 N 0.721
F775_31610 Aegilops tauschii F775_31610 N 0.718
OB05G25990 Oryza brachyantha OB05G25990 N 0.712
GSMUA_Achr11G09110_001 Musa acuminata GSMUA_Achr11G09110_001 N 0.702
GRMZM2G143640 Zea mays GRMZM2G143640 N 0.699
TRAES3BF019300020CFD_g Triticum aestivum TRAES3BF019300020CFD_g N 0.696
Pavir.Ea03744 Panicum virgatum Pavir.Ea03744 N 0.691
Sb03g040730 Sorghum bicolor Sb03g040730 N 0.691
LPERR01G32800 Leersia perrieri LPERR01G32800 N 0.678
GRMZM2G027914 Zea mays GRMZM2G027914 N 0.677
Si003047m.g Setaria italica Si003047m.g N 0.663