Thhalv10006475m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10006475m.g T289980_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10006475m Myb 11 58
Thhalv10006475m Myb 65 110

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10019483m.g Capsella rubella Carubv10019483m.g N 0.869
Bostr.13158s0042 Boechera stricta Bostr.13158s0042 N 0.869
DUO1 Arabidopsis lyrata fgenesh2_kg.5__2511__AT3G60460.1 N 0.869
Bra003413 Brassica rapa Bra003413 N 0.869
Cagra.3527s0008 Capsella grandiflora Cagra.3527s0008 N 0.869
DUO1 Arabidopsis thaliana AT3G60460 N 0.869
Bo6g077030 Brassica oleracea Bo6g077030 N 0.860
Bra007536 Brassica rapa Bra007536 N 0.840
Bo8g095200 Brassica oleracea Bo8g095200 N 0.840
POPTR_0002s14180 Populus trichocarpa POPTR_0002s14180 N 0.839
SapurV1A.0033s0200 Salix purpurea SapurV1A.0033s0200 N 0.836
SapurV1A.0490s0170 Salix purpurea SapurV1A.0490s0170 N 0.822
orange1.1g038795m.g Citrus sinensis orange1.1g038795m.g N 0.816
Ciclev10021345m.g Citrus clementina Ciclev10021345m.g N 0.816
LjT36B17.50.nd Lotus japonicus LjT36B17.50.nd N 0.814
POPTR_0014s05370 Populus trichocarpa POPTR_0014s05370 N 0.814
POPTR_0014s05420 Populus trichocarpa POPTR_0014s05420 N 0.814
TCM_005653 Theobroma cacao TCM_005653 N 0.809
evm.TU.supercontig_37.96 Carica papaya evm.TU.supercontig_37.96 N 0.809
Cucsa.121070 Cucumis sativus Cucsa.121070 N 0.809
Ca_18954 Cicer arietinum Ca_18954 N 0.805
Bostr.13158s0046 Boechera stricta Bostr.13158s0046 N 0.800
Cla006831 Citrullus lanatus Cla006831 N 0.799
Pm019530 Prunus mume Pm019530 N 0.796
Pm031387 Prunus mume Pm031387 N 0.796
PRUPE_ppa016603mg Prunus persica PRUPE_ppa016603mg N 0.796
DUO1 Vitis vinifera VIT_15s0021g02040 N 0.792
MTR_8g006470 Medicago truncatula MTR_8g006470 N 0.792
mgf019330m Mimulus guttatus mgf019330m N 0.792
30174.m008784 Ricinus communis 30174.m008784 N 0.792
PRUPE_ppa020326mg Prunus persica PRUPE_ppa020326mg N 0.789
MDP0000237596 Malus domestica MDP0000237596 N 0.789
Pm017596 Prunus mume Pm017596 N 0.789
MDP0000319634 Malus domestica MDP0000319634 N 0.789
Pavir.Gb01130 Panicum virgatum Pavir.Gb01130 N 0.781
Si012032m.g Setaria italica Si012032m.g N 0.781
Eucgr.E01581 Eucalyptus grandis Eucgr.E01581 N 0.780
Solyc01g090530.1 Solanum lycopersicum Solyc01g090530.1 N 0.778
cassava19913.m1 Manihot esculenta cassava19913.m1 N 0.777
Pavir.Fb01900 Panicum virgatum Pavir.Fb01900 N 0.776
PGSC0003DMG400025720 Solanum tuberosum PGSC0003DMG400025720 N 0.774
Pavir.J35399 Panicum virgatum Pavir.J35399 N 0.773
Pavir.J30013 Panicum virgatum Pavir.J30013 N 0.773
ORGLA04G0178400 Oryza glaberrima ORGLA04G0178400 N 0.765
OPUNC04G18480 Oryza punctata OPUNC04G18480 N 0.765
OMERI04G17240 Oryza meridionalis OMERI04G17240 N 0.765
OB04G27810 Oryza brachyantha OB04G27810 N 0.765
OBART04G20790 Oryza barthii OBART04G20790 N 0.765
OGLUM04G20730 Oryza glumaepatula OGLUM04G20730 N 0.765
BGIOSGA016880 Oryza indica BGIOSGA016880 N 0.765
ONIVA04G19030 Oryza nivara ONIVA04G19030 N 0.765
ORUFI04G22380 Oryza rufipogon ORUFI04G22380 N 0.765
GRMZM2G105137 Zea mays GRMZM2G105137 N 0.765
Traes_2BL_855A1170C Triticum aestivum Traes_2BL_855A1170C N 0.764
Traes_2AL_0A21FB42C Triticum aestivum Traes_2AL_0A21FB42C N 0.764
GLYMA03G26830 Glycine max GLYMA03G26830 N 0.761
Gorai.004G165400 Gossypium raimondii Gorai.004G165400 N 0.761
gene04800-v1.0-hybrid Fragaria vesca gene04800-v1.0-hybrid N 0.760
MTR_4g029540 Medicago truncatula MTR_4g029540 N 0.752
GLYMA07G14480 Glycine max GLYMA07G14480 N 0.752
Pavir.Fa00479 Panicum virgatum Pavir.Fa00479 N 0.745
cassava17368.m1 Manihot esculenta cassava17368.m1 N 0.744
Aquca_081_00025 Aquilegia coerulea Aquca_081_00025 N 0.743
gene12261-v1.0-hybrid Fragaria vesca gene12261-v1.0-hybrid N 0.743
Si015815m.g Setaria italica Si015815m.g N 0.742
BRADI5G17600 Brachypodium distachyon BRADI5G17600 N 0.741
Solyc10g019260.1 Solanum lycopersicum Solyc10g019260.1 N 0.739
Lus10009780.g Linum usitatissimum Lus10009780.g N 0.739
Traes_2DL_912473A86 Triticum aestivum Traes_2DL_912473A86 N 0.738
GRMZM2G311059 Zea mays GRMZM2G311059 N 0.737
Sb06g024510 Sorghum bicolor Sb06g024510 N 0.737
AMTR_s00111p00072510 Amborella trichopoda AMTR_s00111p00072510 N 0.737
GSMUA_Achr1G01660_001 Musa acuminata GSMUA_Achr1G01660_001 N 0.736
Aquca_002_00029 Aquilegia coerulea Aquca_002_00029 N 0.727
Sb07g027160 Sorghum bicolor Sb07g027160 N 0.725
GLYMA09G00371 Glycine max GLYMA09G00371 N 0.721
GLYMA12G37026 Glycine max GLYMA12G37026 N 0.718
Cla010897 Citrullus lanatus Cla010897 N 0.709
GRMZM2G046443 Zea mays GRMZM2G046443 N 0.708
TCM_014872 Theobroma cacao TCM_014872 N 0.707
Ca_19557 Cicer arietinum Ca_19557 N 0.702
Cucsa.094180 Cucumis sativus Cucsa.094180 N 0.684
Gorai.003G112700 Gossypium raimondii Gorai.003G112700 N 0.679
mgf004314m Mimulus guttatus mgf004314m N 0.670
SELMODRAFT_116971 Selaginella moellendorffii SELMODRAFT_116971 N 0.666
SELMODRAFT_118852 Selaginella moellendorffii SELMODRAFT_118852 N 0.666
LPERR04G16870 Leersia perrieri LPERR04G16870 N 0.664