AMTR_s00022p00160350 (Amborella trichopoda)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 AMTR_s00022p00160350 T291979_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC098
M07239_2.00 		Arabidopsis thaliana
CKTGTNNNDYAMGYHA
TDRCKTRHNNNACAMG		 Dap-seq
OMalley et al.(2016)
CUC2_colamp_a 		0.920 0.783
NAC098
M07240_2.00 		Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG
CKTGWDNNDCAMGNWANNN		 Dap-seq
OMalley et al.(2016)
CUC2_col 		0.920 0.783
NAC002
M00970_2.00 		Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN		 PBM
Lindemose et al.(2014)
ATAF1 		0.909 0.626
NAC002
M07159_2.00 		Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM		 Dap-seq
OMalley et al.(2016)
ATAF1_col_a 		0.909 0.626
NAC002
M07160_2.00 		Arabidopsis thaliana
YACGY
RCGTR		 Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a 		0.909 0.626
NAC100
M02375_2.00 		Arabidopsis thaliana
NBAMKNHWNN
NNWDNMKTVN		 PBM
Weirauch et al.(2014)
pTH7239 		0.905 0.774
e_gw1.327.11.1
M02382_2.00 		Physcomitrella patens
NTTDYRTWWN
NWWAYRHAAN		 PBM
Weirauch et al.(2014)
pTH8478 		0.904 0.722
ANAC100
M02377_2.00 		Arabidopsis lyrata
DYACGYHANN
NNTDRCGTRH		 PBM
Weirauch et al.(2014)
pTH9234 		0.901 0.774
NAC92
M00979_2.00 		Arabidopsis thaliana
NNDYACGBHA
TDVCGTRHNN		 PBM
Lindemose et al.(2014)
ANAC092 		0.898 0.757
NAC92
M00730_2.00 		Arabidopsis thaliana
DYACGNHAN
NTDNCGTRH		 PBM
Chang et al.(2013)
pTH7335 		0.898 0.757
NAC92
M07234_2.00 		Arabidopsis thaliana
TWNCKTGHNNHDCAMGYWAY
RTWRCKTGHDNNDCAMGNWA		 Dap-seq
OMalley et al.(2016)
ANAC092_colamp_a 		0.898 0.757
NAC92
M07235_2.00 		Arabidopsis thaliana
WRCKTGTNNNDCAMG
CKTGHNNNACAMGYW		 Dap-seq
OMalley et al.(2016)
ANAC092_col_v3a 		0.898 0.757
NAC079
M02373_2.00 		Arabidopsis thaliana
TTGCGTRY
RYACGCAA		 PBM
Weirauch et al.(2014)
pTH7399 		0.897 0.757
NAC079
M07228_2.00 		Arabidopsis thaliana
CBWNHNNHACACGYWA
TWRCGTGTDNNDNWVG		 Dap-seq
OMalley et al.(2016)
ANAC079_colamp_a 		0.897 0.757
NAC079
M07229_2.00 		Arabidopsis thaliana
NTWNCKTVHNNHWCAMGYWAH
DTWRCKTGWDNNDBAMGNWAN		 Dap-seq
OMalley et al.(2016)
ANAC079_col 		0.897 0.757
NAC48
M11084_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC6_01 		0.896 0.617
ANAC080
M02376_2.00 		Arabidopsis lyrata
NBAMKNHWNN
NNWDNMKTVN		 PBM
Weirauch et al.(2014)
pTH9230 		0.895 0.765
e_gw1.288.15.1
M02381_2.00 		Physcomitrella patens
NNNBAMKNHW
WDNMKTVNNN		 PBM
Weirauch et al.(2014)
pTH8467 		0.895 0.748
NAC031
M07182_2.00 		Arabidopsis thaliana
NTWDCKTGTNNHWYACGY
RCGTRWDNNACAMGHWAN		 Dap-seq
OMalley et al.(2016)
CUC3_col_a 		0.895 0.730
NAC031
M07183_2.00 		Arabidopsis thaliana
CKTGTNNHDCACGYHA
TDRCGTGHDNNACAMG		 Dap-seq
OMalley et al.(2016)
CUC3_colamp_a 		0.895 0.730
NAC59
M11080_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANAC059_01 		0.893 0.739
AT3G12910
M07204_2.00 		Arabidopsis thaliana
YGSCGKNDNDDHNMCGB
VCGKNDHHNHNMCGSCR		 Dap-seq
OMalley et al.(2016)
AT3G12910_col_a 		0.883 0.487
NAC054
M07205_2.00 		Arabidopsis thaliana
CKTVHNNHRCACGYHANCW
WGNTDRCGTGYDNNDBAMG		 Dap-seq
OMalley et al.(2016)
CUC1_colamp_a 		0.880 0.757
NAC054
M07206_2.00 		Arabidopsis thaliana
TWNCKTGHNNNDCAMG
CKTGHNNNDCAMGNWA		 Dap-seq
OMalley et al.(2016)
CUC1_col_v31 		0.880 0.757
NAC69
M07216_2.00 		Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW		 Dap-seq
OMalley et al.(2016)
NTM2_col_b 		0.880 0.452
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN11564 NAC/NAM 16 143

Links

Other NAC/NAM family TFs
Other Amborella trichopoda TFs

Invalid Input OrderBy

615 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action